Table 1 Basic statistics for three assemblies of the mite Fragariocoptes setiger and its microbiome.

From: Symbiotic bacteria of the gall-inducing mite Fragariocoptes setiger (Eriophyoidea) and phylogenomic resolution of the eriophyoid position among Acari

 

Metagenome*

Metatranscriptome*

Mite genome

Contigs number (N)

70,345

31,089

3581

Total contig size (bp)

139,253,250

39,862,892

40,873,958

Longest contig (bp)

423,970

18,766

182,071

Mean contig length (bp)

1979.58

1282.22

11,414.12

Median contig length (bp)

757

826

3603

Standard deviation of contig length (bp)

7685.98

1167.73

18,445.63

Contig L50 (N)

2683

6522

370

Contig N50 (bp)

6218

1643

31,600

Contig L75 (N)

19,995

15,263

834

Contig N75 (bp)

1102

839

15,183

Contig L90 (N)

45,528

23,782

1445

Contig N90 (bp)

641

599

6110

Average coverage

265.81

192.21

4568.12

Median coverage

6.44

10.57

2480.21

Standard deviation of coverage

3185.71

4161.95

6778.21

Total GC content (%)

54.43%

47.38%

43.18%

Average contig GC content (%)

57.27%

47.66%

43.58%

  1. *For contigs ≥ 500 bp only.