Table 1 Number of loci across eight pairs of selective primer combinations with respective methylation loci, nonmethylation loci and percentages of polymorphic loci.
From: Exploring japonica rice epigenetic diversity in the main production regions of Heilongjiang Province
Selective primer combination | Amplicon length (bp) | Number of amplified loci | Number of polymorphic loci | Percentages of polymorphic loci (%) | Number of methylation loci | Number of nonmethylation loci |
|---|---|---|---|---|---|---|
E36/M42 | 40–469 | 74 | 59 | 79.8 | 38 | 36 |
E36/M50 | 37–435 | 68 | 61 | 90.2 | 27 | 41 |
E40/M40 | 41–464 | 68 | 55 | 81.4 | 30 | 38 |
E40/M50 | 40–430 | 67 | 57 | 85.6 | 27 | 40 |
E83/M40 | 41–367 | 51 | 48 | 93.4 | 24 | 32 |
E83/M42 | 42–495 | 84 | 67 | 79.7 | 44 | 40 |
E83/M59 | 38–481 | 65 | 49 | 75.9 | 35 | 30 |
E85/M42 | 39–308 | 74 | 55 | 74.8 | 47 | 27 |
Total | – | 551 | 449 | 81.5 | 267 | 284 |
