Table 3 Summary of clusters and gene sets included in the pattern 3 for the renal IRI time comparison.

From: Temporal and sex-dependent gene expression patterns in a renal ischemia–reperfusion injury and recovery pig model

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I-Immune cell regulation

T cell proliferation and activation

Regulation of leukocyte cell–cell adhesion

Regulation of mononuclear cell proliferation

Toll-Like receptors cascades

MyD88 cascade TLR4 TRIF

II-Morphogenesis development migration

Biomineral tissue development

Positive regulation of endothelial cell migration

Regulation of smooth muscle cell migration

Bone mineralization

Retina development

Regulation of cell motility

EMT

III-Ion transport transmembrane

Regulation of ion transmembrane transporter activity

Phosphorylation

Fatty acid transport

IV-Apoptotic intrinsic extrinsic

Negative regulation of extrinsic apoptotic signaling pathway

V-Oxygen levels hypoxia

Response to decreased oxygen levels

Cellular response to hypoxia

VII-Steroid hormone response

Cellular response to lipid

Cellular response to insulin

Cellular response to hormone

VIII-Regulation hormone secretion

Positive regulation of hormone secretion

Protein transport

Protein localization

Cytokine secretion

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