Table 1 Diagnostic viral read numbers after spiking 5000 genome copies of 5 different cultured viruses into 200 μl human amniotic fluid.
From: Comprehensive human amniotic fluid metagenomics supports the sterile womb hypothesis
Number of genome copies | Species | Nucleic acid | Genome size (kb) | Alignment length (mean bp) | Diagnostic read number (mean ± SD) |
|---|---|---|---|---|---|
5000 | Human alpha-herpesvirus 1 (HSV1) Taxon ID: 10298 | Linear dsDNA | 152 | 1158 | 130 ± 150 |
5000 | CMV Taxon ID: 10359 | Linear dsDNA | 236 | 8787 | 787 ± 272 |
5000 | Influenza A virus Taxon ID: 11320 | Linear ssRNA | 14 | 507 | 118 ± 21 |
5000 | Enterovirus B Taxon ID: 138949 | Linear ssRNA | 7.4 | 813 | 248 ± 82 |
5000 | Parvovirus B19 Taxon ID: 10798 | Linear ssDNA | 5.6 | 654 | 21 ± 3 |
