Table 3 Putative novel drug resistant mutations.

From: Characterisation of drug-resistant Mycobacterium tuberculosis mutations and transmission in Pakistan

Drug

Gene

Change [N]

Amikacin

rrs

−92 T > G [1], 878 g > a [2]

Ciprofloxacin

gyrA

A288D [1]

gyrB

−162C > CG [1], A432V [1]

Ethambutol

embA

16C > A [2], −27TA > T [1], −42CAT > C [1], −8C > A [1], P455Q [1], V534A [1]

embB

R524H [1], D328H [1], D328F [2], L172R [2], F330L [1], T546I [1]

ubiA

G268D [1], F238I [1], V188L [1]

Isoniazid

ahpC

52C > A [1], −72C > T [1], −76 T > A [4], −76 T > C [1], −76 T > G [1], −93G > A [1]

kasA

M72I [1], F402I [1]

katG

587_588insGGT [1], A122D [1], A348G [1], R484G [1], D189Y [1], Q36* [1], G186D [1], G299D [1], I103V [1], L298S [1], M105I [1], F408S [1], P100T [1], T271I [1], T475I [1], T625K [1], W204* [1], W438* [1], Y197D [1]

Kanamycin

eis

L386I [1]

rrs

−92 T > G [1]

Pyrazinamide

pncA

7 T > G [1], 392_393insGGT [1], 451_462del [1], 511_512insTCGCCG [1], L120R [4], P62T [1], P69T [1], S18* [1], V130M [1], V180A [1]

rpsA

98A > T [1], Q410R [2]

Rifampicin

rpoB

1291_1292insGCC [1], 1294_1296del [1], 1309_1311del [1]

Streptomycin

gid

A119D [1], A82P [1], D67G [1], G71* [2]

  1. *Based on absence in the curated TB-Profiler mutation list; bolded, if not observed in a large TB Global dataset (34 k7); underlined, if with multiple levels of evidence for drug resistance (see S8 Table).