Table 1 Details of the SARS-Cov-2 genomes sequenced.

From: Human-to-dog transmission of SARS-CoV-2, Colombia

Host (species)

ID

Lineage

Mutations observeda

Canis lupus familiaris

U117

B.1.625

(n = 21)—M (I82T), N (M210I), M (234I); ORF1a (V86F), ORF1a (L681F), ORF1a (K1319E), ORF1a (T1822I), ORF1a (P2046S), ORF1a (K3353R), ORF1a (P3504S), ORF1a (∆S3675-F3677); ORF1b (K829R), ORF1a (P314L), ORF1a (T1076I); ORF3a (Q57H); ORF8 (∆K2); S (F157L), S (N440K), S (E484K), S (D614G), S (D950N), S (V1228L)

Homo sapiens sapiens

U118

B.1.625

(n = 25)—M (I82T); N (M234I); ORF1a (V86F), ORF1a (L681F), ORF1a (K1319E), ORF1a (T1822I), ORF1a (P2046S), ORF1a (G2509D), ORF1a (K3353R), ORF1a (P3504S), ORF1a (∆S3675-F3677); ORF1b (K82R), ORF1b (P314L), ORF1b (T1076I); ORF3a (Q57H); ORF7a (I110V); ORF8 (∆K2); S (T95I), S (F157L), S (N440K), S (E484K), S (D614G), S (D950N), S (V1228L), S (∆H69-V70), S (∆Y144)

  1. aIn parentheses: amino acid substitutions/position aligned with reference NC_045512.2-Wuhan-Hu-1.
  2. N nucleoprotein, M membrane glycoprotein M, ORF open reading frame, S spike protein.
  3. Proteins with aminoacid substitutions are in [bold].
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