Table 1 Summary of the Klebisella spp. genomes features used in this study.

From: Common and distinctive genomic features of Klebsiella pneumoniae thriving in the natural environment or in clinical settings

 

Clinical

Environmental

Number of isolates

78

61

Number of countries

14

14

Sequencing technologies

Illumina

PacBio

Nanopore

Illumina

PacBio

454

Number of STs

31

39

Unidentified STsa

No

Yes (n = 1)

Most abundant STs (identified in at least 3% of the 139 genomes)

ST11

6

1

ST14

2

5

ST15

4

2

ST23

6

0

ST37

2

2

ST147

14

2

ST258

6

0

ST307

4

0

ST326

4

0

ST392

4

0

ST895

0

4

ST3128

0

4

  1. aUnidentified ST refers to a ST which has not been determined as it has not been possible to obtain the housekeeping gene sequences required for this determination.