Table 1 DEGs mapped to each genome.
From: Comparative transcriptome analysis of synthetic and common wheat in response to salt stress
Group in the Venn diagram | Description of expression | A genome | B genome | D genome | Unknown | Total no. of DEGs | ||||
|---|---|---|---|---|---|---|---|---|---|---|
No DEGs | (%) | No DEGs | (%) | No DEGs | (%) | No DEGs | (%) | |||
Up-regulated | ||||||||||
a | Only E58 | 538 | 32.0 | 524 | 31.2 | 583 | 34.7 | 36 | 2.1 | 1681 |
b | E58, SK | 118 | 31.8 | 119 | 32.1 | 127 | 34.2 | 7 | 1.9 | 371 |
c | Only SK | 477 | 32.2 | 503 | 34.0 | 477 | 32.2 | 23 | 1.6 | 1480 |
d | E58, KU-1797 | 231 | 31.0 | 247 | 33.1 | 262 | 35.1 | 6 | 0.8 | 746 |
e | All | 895 | 31.7 | 884 | 31.3 | 997 | 35.3 | 49 | 1.7 | 2825 |
f | SK, KU-1797 | 953 | 33.2 | 920 | 32.1 | 968 | 33.8 | 26 | 0.9 | 2867 |
g | Only KU-1797 | 758 | 31.2 | 810 | 33.3 | 830 | 34.2 | 31 | 1.3 | 2429 |
| Â | Total | 3970 | 32.0 | 4007 | 32.3 | 4244 | 34.2 | 178 | 1.4 | 12,399 |
Down-regulated | ||||||||||
a | Only E58 | 669 | 32.9 | 635 | 31.2 | 700 | 34.4 | 30 | 1.5 | 2034 |
b | E58, SK | 106 | 32.5 | 109 | 33.4 | 106 | 32.5 | 5 | 1.5 | 326 |
c | Only SK | 481 | 31.4 | 522 | 34.1 | 509 | 33.2 | 21 | 1.4 | 1533 |
d | E58, KU-1797 | 204 | 36.0 | 177 | 31.3 | 176 | 31.1 | 9 | 1.6 | 566 |
e | All | 354 | 33.6 | 348 | 33.0 | 340 | 32.3 | 12 | 1.1 | 1054 |
f | SK, KU-1797 | 975 | 33.3 | 913 | 31.2 | 1003 | 34.3 | 36 | 1.2 | 2927 |
g | Only KU-1797 | 740 | 34.3 | 677 | 31.4 | 719 | 33.3 | 22 | 1.0 | 2158 |
| Â | Total | 3529 | 33.3 | 3381 | 31.9 | 3553 | 33.5 | 135 | 1.3 | 10,598 |
