Table 3 Genes encoding known cold-stress response molecules as predicted in the AK-R2A1-2 T genome.
From: Subtercola endophyticus sp. nov., a cold-adapted bacterium isolated from Abies koreana
Gene namea | Description |
|---|---|
aceE | Pyruvate dehydrogenase E1 component [EC:1.2.4.1] |
aceF | Pyruvate dehydrogenase E2 component [EC:2.3.1.12] |
cspA | Cold shock protein |
deaD | ATP-dependent RNA helicase DeaD [EC:3.6.4.13]) |
dnaA | Chromosomal replication initiator protein |
gyrA | DNA gyrase subunit A [EC:5.6.2.2] |
hupB | DNA-binding protein HU-beta |
infA | Translation initiation factor IF-1 |
infB | Translation initiation factor IF-2 |
infC | Translation initiation factor IF-3 |
nusA | Transcription termination/anti-termination protein NusA |
otsA | Trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] |
otsB | Trehalose 6-phosphate phosphatase [EC:3.1.3.12] |
pnp | Polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] |
rbfA | Ribosome-binding factor A |
recA | Recombination protein RecA |
tig | Trigger factor |
proA | Glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] |
proB | Glutamate 5-kinase [EC:2.7.2.11] |
proC | Pyrroline-5-carboxylate reductase; [EC:1.5.1.2] |
betA | Choline dehydrogenase (betA, [EC:1.1.99.1] |
opuCb | Glycine betaine transport system |
opuAb | Glycine betaine transport system |
opuBDb | Glycine betaine transport system |
