Table 2 List of significantly dysregulated proteins in PPO-KO cells.

From: Generation and characterization of human U-2 OS cell lines with the CRISPR/Cas9-edited protoporphyrinogen oxidase IX gene

Protein name

Fold change

Gene name

Localization

Protein ID

5-Aminolevulinate synthase 1

77.77

ALAS1

Mitochondrial matrix, cytosol, nucleus

P13196

Coiled-coil domain containing 32

6.08

CCDC32

Nucleus

Q9BV29

Gametocyte-specific factor 1

3.39

GTSF1

Cytosol

Q8WW33

Voltage-dependent calcium channel subunit alpha-2/delta-1

2.22

CACNA2D1

Plasma membrane

P54289

Methylated-DNA–protein-cysteine methyltransferase

2.05

MGMT

Nucleus, membrane, cytosol, mitochondria

P16455

TBC1 domain family member 2A

2.01

TBC1D2

Cytosol, nucleoplasm, plasma membrane

Q9BYX2

Beta-enolase

1.85

ENO3

Cytosol, membrane

P13929

Cytochrome b-c1 complex subunit 6, mitochondrial

0.63

UQCRH

Mitochondria, OXPHOS complex III

P07919

Cytochrome c oxidase subunit 6C

0.57

COX6C

Mitochondria, OXPHOS complex IV

P09669

Cytochrome c1, heme protein, mitochondrial

0.55

CYC1

Mitochondria, OXPHOS complex III

P08574

Cytochrome c oxidase subunit NDUFA4

0.52

NDUFA4

Mitochondria, OXPHOS complex IV

O00483

Nurim

0.51

NRM

Nuclear membrane

Q8IXM6

Cytochrome c oxidase subunit 6B1

0.50

COX6B1

Mitochondria, OXPHOS complex IV

P14854

Lanosterol 14-alpha demethylase

0.49

CYP51A1

Endoplasmic reticulum, membrane

Q16850

Cytochrome c oxidase subunit 3

0.46

MT-CO3

Mitochondria, OXPHOS complex IV

P00414

DBH-like monooxygenase protein 1

0.45

MOXD1

Cytosol, membrane, secretory granule

MOXD1

Cytochrome c oxidase subunit 6A1, mitochondrial

0.39

COX6A1

Mitochondria, OXPHOS complex IV

P12074

ADP-ribosylation factor-like protein 6-interacting protein 6

0.38

ARL6IP6

Membrane

Q8N6S5

Cell division cycle protein 20 homolog

0.35

CDC20

Nucleus, cytosol

Q12834

Cytochrome c

0.34

CYCS

Mitochondria, cytosol

P99999

Cytochrome B561 family member D2

0.26

CYB561D2

Endoplasmic reticulum, membrane

O14569

Protoporphyrinogen oxidase

NaN

PPOX

Mitochondrial matrix

P50336

  1. Value represents the fold change of the protein expression level relative to the control group. Heme-related proteins are shown in bold.
  2. NaN not a number.