Table 4 List of plasmids and strains used in the study.

From: Characterization of a GH5 endoxylanase from Penicillium funiculosum and its synergism with GH16 endo-1,3(4)-glucanase in saccharification of sugarcane bagasse

Strains

Description

References/sources

Escherichia coli DH5α

F-Φ80lacZΔM15 Δ(lacZYA-argF) U169 recA1 endA1 hsdR17

Invitrogen

Agrobacterium tumefaciens LBA4404

Ach5 with pAch5, Δtra Δocc ΔTL ΔTR Rifr

33

Pichia pastoris X-33

Wild type

Invitrogen18

Penicillium funiculosum NCIM1228

Cellulase-producing fungus obtained from NCIM (National Culture Collection Centre, Pune, India)

18

PfMig188

Catabolite derepressed strain of Penicillium funiculosum NCIM1228

33

PfOAO6

Xylanase (Xyn5) overexpression in PfMig188 with the help of pOAO7 vector

This study

PfOAO7

Endo-β-1,3(4) glucanase (Egl16) overexpression in PfMig188 with the help of pOAO9 vector

This study

PfOAO8

Xylanase and endo-β-1,3(4) glucanase co-overexpression in PfMig188 with the help of pOAO10 vector

This study

Plasmids

pPICZαA

A zeocin-resistant vector for protein expression in P. pastoris under the control of AOX1 promoter

Genscript

pOAO6

A pPICZαA vector containing the PfGH5 gene under the control of AOX1 promoter

This study

pBIF

Kanamycin and hygromycin resistant vector containing EGFP

37

pJET

Standard cloning vector containing the ampicillin-resistant gene

XB-VEC-1221267

pOAO7

pBIF vector containing the PfXyn5 gene along with its native promoter and terminator

This study

pOAO8

pJET vector containing the endo-β-1,3(4) glucanase gene along with its native promoter and terminator

This study

pOAO9

pBIF vector containing endo-β-1,3(4) glucanase gene along with its native promoter and terminator

This study

pOAO10

pBIF vector containing xylanase and endo-β-1,3(4) glucanase genes along with their native promoter and terminator

This study