Table 3 Common and frequent IS6110 locations in the strains studied, grouped by lineage.
5’-IS point | 3’-IS point | Direct repeat | Gene | Direction | ||
|---|---|---|---|---|---|---|
L4.3 | 3,480,373 | 3,480,371 | cag | Rv3113 | Forward | 100% strains |
932,202 | 932,204 | aac | lpqQ:Rv0836c | Reverse | ||
1,987,457 | 1,986,625 | – | plcD/Rv1754c | Reverse | ||
1,989,080 | 1,986,625 | – | cut1/Rv1754c | Reverse | ||
1,986,623 | 1,986,625 | aac | Rv1754c | Reverse | ||
1,989,080 | 1,979,923* | cgc | cut1 | Reverse | 81.8% strains | |
1,989,080 | 1,986,625 | – | cut1/Rv1754c | Reverse | ||
2,633,843 | 2,633,841 | ctc | ppe38 | Reverse | 45.5% strains | |
3,665,157* | 3,665,159* | caa | MT3426:MT3427 | Reverse | 91% strains | |
3,665,159* | 3,668,981* | – | MT3426:MT3427/IS1547 | Forward | ||
L4.8 | 3,668,619* | 3,668,723* | – | MT3429 | Forward | 100% strains |
1,895,651 | 1,895,654 | ccta | Rv1668c:Rv1669 | Reverse | ||
1,986,939* | 1,986,937* | acc | Rv1762c:Rv1763 | Forward | ||
1,979,901* | 1,986,937* | – | cut1/Rv1762c:Rv1763 | Forward | ||
2,604,207* | 2,604,210* | gaaa | ppe71 | Reverse | 85.7% strains | |
889,020 | 890,375 | gagg | Rv0795-Rv0796 | Forward | 85.7% strains | |
L4.1.2.1 | 1,075,948 | 1,075,950 | acc | Rv0963c | Reverse | 100% strains |
1,986,626 | 1,986,622 | tgttc | Rv1754c | Forward | ||
483,296 | 483,298 | agg | Rv0403c | Reverse | ||
2,610,863 | 2,610,861 | gcc | Rv2336 | Forward | ||
3,668,575* | 3,668,756* | – | MT3429 | Forward |
