Table 2 Variant B.1.1.

Deletion name	Amplicon	Δ (deleted nt positions)	aa	Δ size (nts deleted)	reads Δ	Total reads	Population frequency (%)
Δ108T–110L	A72	324–328	Δ108T–110L	Δ5	96	65,086	0.15
Δ244L–246R	A73–A74	731–738	Δ244L–246R	Δ5 to Δ6	509	218,599	0.23
Δ393T–394 N	A75	1177–1180	Δ393T–394 N	Δ4	441	87,224	0.51
Δ428D–433 V	A76	1284–1297	Δ428D–433 V	Δ14	449	78,022	0.58
Δ541F–546L	A77	1622–1638	Δ541F–546L	Δ17	540	82,513	0.65
Δ624I–629L	A77	1871–1887	Δ624I–629L	Δ17	458	82,513	0.56
Δ639F–646L	A78	1929–1948	Δ639F–646L	Δ20	139	66,033	0.21
Δ660I–670Y	A78	1991–2020	Δ660I–670Y	Δ28 to Δ29	275	119,349	0.23
Δ752L–753L	A79	2256–2259	Δ752L–753L	Δ4	148	67,171	0.22
Δ817F–822L	A79	2451–2466	Δ817F–822L	Δ16	313	67,171	0.47
Δ1262E–1263P	A84	3785–3788	Δ1262E–1263P	Δ4	40	21,1	0.19

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