Table 5 Quantitative performance comparison between MRI-based liver parenchyma and liver veins segmentation methods.

From: Convolutional neural network for automated segmentation of the liver and its vessels on non-contrast T1 vibe Dixon acquisitions

 

Model

Liver parenchyma

Portal veins

Hepatic veins

 

Dataset

   
  

Mean ± SD

Median (IQR)

Median (IQR)

Contrast enhanced

MRI characteristrics

Subjects

Name

Test size, n

Kavur et al.14

nnU-Net

0.954 ± 0.01

-

-

No

T1-DUAL in-phase, opposed-phase

healthy

CHAOS

20

Kart et al.13

nnU-Net

0.972 ± 0.02

-

-

No

T1 Dixon water

healthy

UKBB

200

Kart et al.13

nnU-Net

0.984 ± 0.01

-

-

No

T1 Dixon in-phase, opposed-phase, water, fat

healthy

GNC

200

Ivashchenko et al.25

workflow

0.950 ± 0.01

-

-

Yes

multiphase T1 mDixon water

lesions

private

15

Ivashchenko et al.26

DVNet

-

0.603 (0.08)

0.647 (0.05)

Yes

T1 mDixon

tumors

private

20

Ours

nnU-Net

0.936 ± 0.02

0.659 (0.11)

0.548 (0.16)

No

T1 Dixon in-phase, opposed-phase, water, fat

lesions

private

30

  1. Summary of papers on MRI liver and vessels segmentation. Our study is the first to evaluate a 3D convolutional neural network (nnU-Net23) for automated segmentation on non-contrast T1 vibe Dixon liver MRIs with lesions.
  2. All scores are in Dice metric. Liver parenchyma results are shown as mean ± SD. The portal veins and hepatic veins segmentation results are compared using median and interquartile range (IQR). The MRI dataset used by each method is summarized.
  3. MRI, magnetic resonance imaging; CHAOS, combined healthy abdominal organ segmentation challenge; UKBB, UK Biobank; GNC, German National Cohort.