Table 1 The sequences of specific primer.

From: Transcriptome-wide analysis reveals the coregulation of RNA-binding proteins and alternative splicing genes in the development of atherosclerosis

Gene name

Primer sequence (5′ to3′)

GAPDH-F

GGTCGGAGTCAACGGATTTG

GAPDH-R

GGAAGATGGTGATGGGATTTC

THEMIS2-F

CTGTCTTCCTCATCTCTGTAG

THEMIS2-R

AAGGTCCTAAGGTTGTGTTC

TLR1-F

CCTCTAACACTTCACTTGATAC

TLR1-R

TTAACTGACCTTCCTGGATG

RBM47-F

ACACAGTGGGAATGACAG

RBM47-R

ACAGTGGAGCACATGATC

DDX60L -F

AGTGGTAGTGAGCAGAGAT

DDX60L -R

TGGTATTAGGAGATGATAGGTC

PARP12-F

CTTGGAGGAGGTGGTGTA

PARP12-R

GAGCAACGCCTTCTATGA

IL18-F

GCTAGAAAGTATCCTTCGTATG

IL18-R

GAATCCTCCTGATAACATCAAG

SMAD9-F

TACACATCTTGGTCAGTTCA

SMAD9-R

ACTATCAACACGGCTTCC

CIITA -F

CGGAATGAACCACATCTTG

CIITA -R

CGCAATGTCCTTCAGAGA

SAMHD1-F

AGGCTGGTCTCAACTCTT

SAMHD1-R

TTGTATCATTGTGCTGTCTG

ITGB2-F

TAACCTCACCAACCTCAAG

ITGB2-R

AGGATGTCACCAATTAACCA

TLR7-F

GGCTCTGATTCTCCTGTAAT

TLR7-R

AACTCCTGACCTCGTGAT

PRKACB-M-F

GTGGAGAGCGTGAAAGAGTT

PRKACB-AS-F

GACAGATCAATGAAAGAGTT

PRKACB-M/AS-R

TGAGTTGGATTCTCCCATTT

ABI1-M-F

TGAGCCCGGGGCTGGTCCAAT

ABI1-AS-F

GCAATAGAAACTGGTCCAAT

ABI1-M/AS-R

AAGTAGTGGAGGAAGTGGAAG

PPP3CB -M-F

GCAGCTGAACCATCAAACTG

PPP3CB -AS-F

GCTGAACCTACATCAAACTG

PPP3CB -M/AS-R

TCTGAGTATTTGCTCTGATG

CHID1-M/AS-F

CTTCTCCAGCAGCGTCTTTG

CHID1-AS-R

AGCCTGGCCAGCCCTCTGGAC

CHID1-M-R

AACAACCAGGTCCCTCTGGAC

ELF1-M/AS-F

CAGTTTTCCTGGTTCATTGA

ELF1-AS-R

ATACTTGAAGGCCAAGAAGC

ELF1-M-R

TGCTTGTCAGGCCAAGAAGC

FXR1-M/AS-F

CCAGCGAATCTCATCACAGT

FXR1-AS-R

CATCTTTTGCCTAGCCCATT

FXR1-M-R

GCAACTGTGACTAGCCCATT

BCLAF1-M-F

TTTATGTTTACTGTCATCTT

BCLAF1-AS-F

TACATTTTTGCTGTCATCTT

BCLAF1-M/AS-R

AAGTAAAGAACGGGGAGATT

PLEC -M/AS-F

TGTCGCATCCACTGAAGCAG

PLEC -AS-R

TGCAGGATGGGGAGCTGCAGCT

PLEC -M-R

TGAGGGCCAACGAGCTGCAGCT

BNIP2-M-F

CTTGATCAACTTGTTTTATGC

BNIP2-AS-F

CTTCTTCATACTGTTTTATGC

BNIP2-M/AS-R

CGTGTTTAATTTGGCAGAAC

ERG -M/AS-F

CTTTAGTTGCCCTTGGTTCT

ERG -AS-R

TGTGCATGGGGTTATTCCAGG

ERG -M-R

CGGCGCTCAGGTTATTCCAGG