Table 2 LPS-induced inflammation associated signaling pathways and genes expression.
From: Novel long non-coding RNAs associated with inflammation and macrophage activation in human
Gene | Log2 fold change |
|---|---|
Apoptosis signaling | |
BIRC3 | 9.23 |
TNF | 8.11 |
NFKB2 | 5.35 |
NFKBIA | 5.26 |
BCL2A1 | 4.94 |
NFKB1 | 4.49 |
RELB | 4.00 |
MAP2K3 | 3.88 |
CFLAR | 3.58 |
TNFSF10 | 3.57 |
Toll receptor signaling | |
NR4A1 | 7.99 |
SRC | 6.57 |
BMP6 | 544 |
MAP3K8 | 5.27 |
SMAD1 | 4.92 |
PTGIR | 3.98 |
ATF3 | 3.89 |
MAP2L3 | 3.88 |
JUNB | 3.42 |
PTGER4 | 3.07 |
Gonadotropin-releasing hormone | |
TNFAIP3 | 6.04 |
PTGS2 | 5.95 |
NFKB2 | 5.35 |
MAP3K8 | 5.27 |
NFKBIA | 5.26 |
IFNB1 | 4.75 |
NFKB1 | 4.49 |
IRF7 | 3.90 |
MAP2K3 | 3.88 |
MYD88 | 2.65 |
Gonadotropin-releasing hormone | |
NR4A1 | 7.99 |
SRC | 6.57 |
BMP6 | 5.44 |
MAP3K8 | 5.27 |
SMAD1 | 4.92 |
PTGIR | 3.98 |
ATF3 | 3.89 |
MAP2K3 | 3.88 |
JUNB | 3.42 |
PTGER4 | 3.07 |
CCKR signaling map | |
BIRC3 | 9.29 |
NR4A1 | 7.99 |
CXCL8 | 6.68 |
SRC | 6.57 |
CXCL1 | 6.44 |
PTGS2 | 5.95 |
IER3 | 5.28 |
NFKBIA | 5.26 |
CETP | 4.59 |
SNAI1 | 3.10 |
Inflammation mediatedby chemikines | |
CCL3L3 | 11.13 |
CCL8 | 9.82 |
CCL3 | 9.20 |
IL6 | 3.71 |
IL1B | 7.52 |
BCL3,AC092066 | 6.96 |
CXCL10 | 6.80 |
CCL20 | 6.71 |
CXCL8 | 6.68 |
GNG4 | 6.27 |
Interleukin signaling | |
IL6 | 8.71 |
CXCL8 | 6.68 |
IL23A | 6.51 |
STAT4 | 6.26 |
ILIA | 4.94 |
IL15RA | 4.39 |
IL15 | 3.71 |
IL10RA | 3.52 |
STAT5A | 3.50 |
STAT2 | 3.02 |
Oxidative stress response | |
DUSP8 | 5.21 |
DUSP2 | 5.00 |
MAP2K3 | 3.88 |
DUSP1 | 3.52 |
DUSP16 | 3.21 |
AC067945,STAT1 | 2.58 |
MYC | 2.05 |
DUSP4 | 1.99 |
TXNL1 | 1.40 |
JUN | 1.25 |
JAK STAT signaling | |
STAT4 | 6.26 |
SOCS1 | 4.88 |
STAT5A | 3.50 |
STAT2 | 3.02 |
AC067945,STAT1 | 2.53 |
JAK1 | 1.10 |
STAT3 | 1.10 |
