Table 2 DEGs identified in the studies analyzed of shoot (universal DEGs).

From: Comprehensive RNA-Seq-based study and metabolite profiling to identify genes involved in podophyllotoxin biosynthesis in Linum album Kotschy ex Boiss. (Linaceae)

BinCode

BinName

fusarium

ABA

k

drought

3

Minor CHO metabolism

Up

Down

Up

Down

16

Secondary metabolism

Down

Up

Down

Up

20

Stress

Up

Down

Up

Up

26

Misc

down/up

Down/up

down/up

Up

27

RNA.regulation of transcription

Up

Down

Up

Down

33

Development

Up

Down

Up

Down

35

Not assigned

Up

Down/up

Up

Down/up

10

Cell wall

Down

Up

Down

Up

11

Lipid metabolism

Up

Down

Down

Down

29.5

Protein.degradation

Down/up

Up

Down/up

down/up

  1. Up: Gene sets belonging to the corresponding group were upregulation.
  2. Down: Gene sets belonging to the corresponding group were downregulation.
  3. Down/up: Gene sets belonging to the corresponding group were up/downregulation.