Table 3 DEGs identified in the studies analyzed of root (universal DEGs).

From: Comprehensive RNA-Seq-based study and metabolite profiling to identify genes involved in podophyllotoxin biosynthesis in Linum album Kotschy ex Boiss. (Linaceae)

BinCode

BinName

Zn deficiency

Al toxicity

8

TCA/org. transformation

Down

Down

16

Secondary metabolism

Down/up

Down

20

Stress

Down

Down

21

Redox

Up

Up

26

Misc

Down/up

Down/up

31

Cell

Down

Down

33

Development

Down

Down/up

34

Transport

Down

Down

35

Not assigned

Down

Down

10

Cell wall

Down

Down

11

Lipid metabolism

Down

Down/up

17

Hormone metabolism

Up

Down

29.5

Protein.degradation

Down

Down

30.2

Signalling.receptor kinases

Down

Down

  1. Up: Gene sets belonging to the corresponding group were upregulation.
  2. Down: Gene sets belonging to the corresponding group were downregulation.
  3. Down/up: Gene sets belonging to the corresponding group were up/downregulation.