Figure 11
From: Computing all persistent subspaces of a reaction-diffusion system
The lattice of the 13 SORs of the artificial 3-generator model. For each SOR S, the corresponding DO D with the minimal compartmentalization is considered to provide the following information about S in its node: in the first line: reactions of S and overproduced (OP) species, in the second line: species of D and in the third line: minimal compartmentalization. A reaction resp. species of S is marked green if it is new, that is, if it does not appear in any SOR that is a subset of S. If there is only one compartment, then D is an organization and the border of the node is a rectangle (instead of an ellipse). Two SORs are linked by a line if their reactions form subsets and there is no other SOR between them. Such a line is red to indicate that the two linked SORs have the same set of species in their respective DOs. This marks different activation/deactivation patterns of reactions solely caused by different compartmentalizations of one and the same set of species.
