Figure 4 | Scientific Reports

Figure 4

From: Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys

Figure 4

Spatial organization of putative DNT cells in normal and ischemic injury kidney samples. (A). Schematic showing the workflow of generating each 10X Visium spatial dataset. (B). Deconvolved cell type spot proportions for Visium data of normal (top) or ischemic (bottom) kidney tissue sections represented as pie charts. (C). Heatmap of scaled gene expression for Fc Epsilon Receptor Ig (Fcer1g) and Cd44 across the deconvolved cell types. (D). Spot proportions of normal kidney cell type 10 and 11 (top) and ischemic injury cell type 4, 7, and 12 (bottom). (E). Counts per million normalized gene counts in each spot of the normal and ischemic kidney Visium datasets for Fcer1g and Cd44.

Back to article page