Table 2 Upregulated genes involved in dormancy/sprout inhibition in radiation treated potato tubers stored for 90 days.
Gene names | UniProt entry name | Protein names | Functional category | Function | Fold change (upregulated) | ||
|---|---|---|---|---|---|---|---|
Santana | Kufri Frysona | Lady Rosetta | |||||
PGSC0003DMG400025282 | M1CDC2_SOLTU | Apetala2/Ethylene Response Factors (AP2/ERF) domain-containing transcription factor | ABA metabolism | Positively regulate cold response, ethylene response and ABA response; negatively regulate development | 31.32 | 9.60 | 3.96 |
PGSC0003DMG400036493 | M1DCS9_SOLTU | AP2/ERF domain-containing transcription factor | Positively regulate cold response, ethylene response and ABA response; negatively regulate development | 14.17 | 4.30 | 3.01 | |
PGSC0003DMG400037250 | M1DEB7_SOLTU | S-adenosylmethionine synthase (SbSAMS) | Biosynthesis of SAM, precursor of ethylene, SAM upregulates ABA and ethylene biosynthesis path genes | 2.42 | 3.77 | 2.89 | |
PGSC0003DMG400016744 | M1BE67_SOLTU | Short chain alcohol dehydrogenase (SCAD) | Penultimate step of ABA biosynthesis, ABA helps embryo to survive desiccation during dormancy | 17.30 | 9.86 | 107.27 | |
PGSC0003DMG400024249 | M1C8V8_SOLTU | Gibberellin 20-oxidase-1 (StGA20ox1) | GA metabolism | Key oxidase enzyme in the biosynthesis of gibberellin. StGA20ox1 controls stem elongation and tuber formation but has no role in dormancy in potato tuber | 2.52 | 3.17 | 7.03 |
PGSC0003DMG402025083 | M1CCJ9_SOLTU | Auxin oxidase (PRX: Peroxidase) | Auxin metabolism | Auxin catabolism | 3.15 | 5.63 | 131.52 |
PGSC0003DMG400020139 | M1BSE6_SOLTU | Auxin-responsive protein (ARP) | Transcriptional factors, repressors of early auxin response genes | 59.30 | 6.55 | 20.87 | |
PGSC0003DMG400006108 | M1A6C5_SOLTU | 4.67 | 2.59 | 15.67 | |||
PGSC0003DMG400019302 | M1BP59_SOLTU | 2.37 | 2.65 | 2.43 | |||
PGSC0003DMG400025856 | M1CFP5_SOLTU | Auxin and ethylene responsive Gretchen Hagen 3 (GH3) | IAA homeostasis by encoding auxin conjugating enzymes | 7.32 | 6.67 | 24.07 | |
PGSC0003DMG400012186 | M1AW72_SOLTU | 1-amino-cyclopropane-1-carboxylate synthase (ACS) | Ethylene metabolism | Second and rate limiting step of ethylene biosynthesis from SAM via ACC | 26.93 | 4.13 | 3.31 |
PGSC0003DMG400003530 | M0ZVK4_SOLTU | Abscisic acid and environmental stress-inducible protein TAS14 | Osmotic and dehydration stress tolerance | 136.36 | 3.99 | 96.32 | |
PGSC0003DMG400008248 | M1AEV1_SOLTU | Wound-responsive AP2 like factor 2 (WRAF2) | Others | Adaptation during seed dormancy | 16.90 | 4.30 | 3.01 |
PGSC0003DMG400008264 | M1AEW8_SOLTU | 34.93 | 9.89 | 8.36 | |||
PGSC0003DMG400008265 | M1AEW9_SOLTU | 26.06 | 5.40 | 2.43 | |||
PGSC0003DMG400023910 | M1C7H6_SOLTU | Exocyst subunit Exo70 family protein (EXO70) | Exocyst complex, determinant of cellular polarity therefore promote growth. Overexpression inhibits growth of pollen tube | 15.56 | 3.45 | 2.28 | |
PGSC0003DMG400023909 | M1C7H5_SOLTU | 21.32 | 3.45 | 2.28 | |||
