Table 2 Characteristics of putative pre-miRNA156 in oat.
S. no | Group | Chr | miR156 Ids | Start | End | Str | LP | MFE (kcal/mol) | NM |
---|---|---|---|---|---|---|---|---|---|
1 | I | 2A | AsmiR156a-A | 34,17,05,476 | 34,17,05,655 | Reverse | 180 | āĀ 86 | 2 |
2 | 2C | AsmiR156a-C | 45,92,20,714 | 45,92,20,907 | Reverse | 194 | āĀ 101.8 | 2 | |
3 | 2D | AsmiR156a-D | 13,44,21,557 | 13,44,21,737 | Reverse | 181 | āĀ 93.8 | 3 | |
4 | II | 3A | AsmiR156b-A | 7,22,01,197 | 7,22,01,377 | Reverse | 181 | āĀ 68.6 | 1 |
5 | 3C | AsmiR156b-C | 43,59,00,105 | 43,59,00,292 | Forward | 188 | āĀ 85.3 | 3 | |
6 | 3D | AsmiR156b-D | 2,95,36,326 | 2,95,36,523 | Reverse | 198 | āĀ 82.2 | 1 | |
7 | III | 3A | AsmiR156c-A | 7,22,01,601 | 7,22,01,805 | Reverse | 205 | āĀ 53.9 | 4 |
8 | 3C | AsmiR156c-C | 43,58,99,669 | 43,58,99,861 | Forward | 193 | āĀ 76.1 | 2 | |
9 | 3D | AsmiR156c-D | 2,95,36,719 | 2,95,36,921 | Reverse | 203 | āĀ 64.5 | 2 | |
10 | IV | 5A | AsmiR156d-A | 41,71,67,598 | 41,71,67,802 | Reverse | 205 | āĀ 79.2 | 3 |
11 | 5C | AsmiR156d-C | 45,37,82,523 | 45,37,82,730 | Reverse | 208 | āĀ 72 | 2 | |
12 | 5D | AsmiR156d-D | 37,11,50,225 | 37,11,50,437 | Forward | 213 | āĀ 88.1 | 3 | |
13 | V | 6A | AsmiR156e-A | 2,09,50,309 | 2,09,50,482 | Reverse | 174 | āĀ 69.7 | 2 |
14 | 6C | AsmiR156e-C | 18,97,18,886 | 18,97,19,071 | Reverse | 186 | āĀ 70.1 | 2 | |
15 | 2D | AsmiR156e-D | 9,80,14,977 | 9,80,15,155 | Reverse | 179 | āĀ 76.2 | 2 | |
16 | VI | 6A | AsmiR156f-A | 28,33,67,292 | 28,33,67,471 | Forward | 180 | āĀ 90.5 | 3 |
17 | 6C | AsmiR156f-C | 56,00,09,653 | 56,00,09,822 | Forward | 170 | āĀ 89.1 | 3 | |
18 | 6D | AsmiR156f-D | 24,00,58,412 | 24,00,58,591 | Forward | 180 | āĀ 91.6 | 3 | |
19 | VII | 7A | AsmiR156g-A | 19,45,68,262 | 19,45,68,444 | Reverse | 183 | āĀ 57.7 | 2 |
20 | 5C | AsmiR156g-C | 11,18,83,176 | 11,18,83,398 | Reverse | 223 | āĀ 81.5 | 4 | |
21 | 7D | AsmiR156g-D | 10,50,94,730 | 10,50,94,993 | Reverse | 264 | āĀ 102.8 | 2 |