Table 2 Experimental pIC50 (pIC50Exp), predicted pIC50 (pIC50Pred), and residual (Res = pIC50Exp − pIC50Pred) values for the training and test sets compounds based on the Py-CoMFA models built using steric field, 2 Å grid spacing, and the Kennard-Stone training and test sets splitting method, as probe atoms Csp3 (charge = + 1), H (charge = + 1), and Osp3 (charge = − 1).
Classes | pIC50Exp | Csp3 (+ 1) | Osp3 (− 1) | H (+ 1) | |||
---|---|---|---|---|---|---|---|
pIC50Pred | Res | pIC50Pred | Res | pIC50Pred | Res | ||
Chromones | |||||||
1a | 5.854 | 5.858 | − 0.004 | 5.837 | 0.017 | 5.911 | − 0.057 |
*1b | 5.046 | 5.757 | − 0.712 | 5.716 | − 0.670 | 5.805 | − 0.759 |
1c | 5.310 | 5.308 | 0.002 | 5.369 | − 0.059 | 5.269 | 0.041 |
1d | 5.260 | 5.265 | − 0.006 | 5.233 | 0.027 | 5.254 | 0.006 |
Pyrimidines | |||||||
2a | 4.921 | 4.918 | 0.003 | 4.918 | 0.003 | 4.611 | 0.310 |
2b | 4.000 | 4.005 | − 0.005 | 4.042 | − 0.042 | 3.992 | 0.008 |
2c | 4.000 | 4.019 | − 0.019 | 3.973 | 0.027 | 4.054 | − 0.054 |
2d | 4.000 | 3.980 | 0.020 | 3.984 | 0.016 | 4.128 | − 0.128 |
*2e | 4.000 | 4.338 | − 0.338 | 4.382 | − 0.382 | 4.462 | − 0.462 |
*2f | 4.328 | 4.786 | − 0.458 | 4.755 | − 0.427 | 5.059 | − 0.731 |
Phenylhydrazines | |||||||
3a | 4.921 | 4.925 | − 0.004 | 4.874 | 0.047 | 4.903 | 0.018 |
3b | 4.921 | 4.936 | − 0.015 | 4.924 | − 0.003 | 4.800 | 0.121 |
3c | 4.420 | 4.429 | − 0.009 | 4.436 | − 0.016 | 4.542 | − 0.122 |
3d | 4.000 | 3.994 | 0.006 | 3.990 | 0.010 | 4.165 | − 0.165 |
3e | 4.000 | 3.990 | 0.010 | 4.001 | − 0.001 | 4.120 | − 0.120 |
3f | 4.432 | 4.433 | − 0.009 | 4.415 | 0.017 | 4.310 | 0.122 |
Cinnamides | |||||||
4a | 5.161 | 5.148 | 0.014 | 5.148 | 0.013 | 5.158 | 0.003 |
4b | 5.252 | 5.266 | − 0.014 | 5.107 | 0.145 | 5.156 | 0.096 |
*4c | 5.745 | 5.726 | 0.019 | 5.808 | − 0.063 | 5.615 | 0.130 |
*4d | 5.187 | 5.639 | − 0.452 | 5.579 | − 0.392 | 5.527 | − 0.340 |
4e | 5.602 | 5.668 | − 0.066 | 5.734 | − 0.132 | 5.587 | 0.015 |
*4f | 4.745 | 4.741 | 0.003 | 4.920 | − 0.175 | 5.109 | − 0.364 |
*4g | 5.046 | 4.974 | 0.072 | 5.055 | − 0.009 | 5.060 | − 0.014 |
4h | 5.886 | 5.811 | 0.075 | 5.791 | 0.095 | 5.543 | 0.343 |
*4i | 5.398 | 4.841 | 0.557 | 4.585 | 0.813 | 4.508 | 0.890 |
4j | 5.260 | 5.269 | − 0.010 | 5.248 | 0.012 | 5.320 | − 0.060 |
4k | 5.620 | 5.624 | − 0.004 | 5.627 | − 0.007 | 5.493 | 0.127 |
Cinnamic esters | |||||||
5a | 5.553 | 5.565 | − 0.012 | 5.567 | − 0.014 | 5.670 | − 0.117 |
5b | 5.523 | 5.503 | 0.020 | 5.481 | 0.042 | 5.664 | − 0.141 |
5c | 5.721 | 5.730 | − 0.009 | 5.682 | 0.039 | 5.769 | − 0.048 |
5d | 3.699 | 3.696 | 0.003 | 3.720 | − 0.021 | 3.524 | 0.175 |
5e | 4.444 | 4.439 | 0.004 | 4.432 | 0.012 | 4.502 | − 0.058 |
*5f | 5.678 | 4.822 | 0.855 | 4.860 | 0.818 | 4.396 | 1.282 |
Cinnamic acid | |||||||
6 | 5.824 | 5.808 | 0.016 | 5.877 | − 0.053 | 5.773 | 0.051 |