Figure 3 | Scientific Reports

Figure 3

From: Single-cell RNA-seq reveals the effects of the FecB mutation on the transcriptome profile in ovine cumulus cells

Figure 3

Annotation of immune cells and cumulus cells in ovine preovulatory follicles. (A) Immune cells were annotated with the following marker genes: AIF1, CD14, CD36, Cd19 and C1QA. (B) Aggregate expression abundance of marker genes for all immune cells. (C) Violin and bubble plots for expression of immune cell marker genes. (D) Cumulus cells annotation with marker genes (INHA, FST, FSHR, IGFBP5, NR5A2, CYP11A1, FOXL2 and AMH). (E) Aggregate expression abundance of marker genes for all cumulus cells. (F) Violin and bubble plots for expression of cumulus cell marker genes. (G) Stacked plot of cell numbers for annotated cells in all 22 cell clusters.

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