Table 2 Analytes (serum proteins) significantly correlated to MRI-PDFF, ALT and AST at baseline.

From: SomaLogic proteomics reveals new biomarkers and provides mechanistic, clinical insights into Acetyl coA Carboxylase (ACC) inhibition in Non-alcoholic Steatohepatitis (NASH)

Target

Entrez gene symbol

Baseline analyte vs MRI-PDFF

Baseline analyte vs ALT

Baseline analyte vs AST

Spearman's correlation

P-value

Adjusted P-value

Spearman's correlation

P-value

Adjusted P-value

Spearman’s correlation

P-value

Adjusted P-value

Beta-glucuronidase

GUSB

0.473609275

6.34E − 14

4.79E − 10

0.461260104

1.43E − 13

5.35E − 12

0.369904424

6.69E − 09

1.38E − 07

Triggering receptor expressed on myeloid cells 2

TREM2

0.411591739

1.43E − 10

5.42E − 07

0.415184291

4.86E − 11

1.47E − 09

0.474059278

2.41E − 14

7.98E − 13

Adenylosuccinate synthetase isozyme 1

ADSS1

0.403843059

3.39E − 10

8.54E − 07

0.71532604

1.66E − 37

3.59E − 35

0.713702227

2.87E − 37

3.55E − 35

Tetratricopeptide repeat protein 36

TTC36

0.383538718

2.91E − 09

5.49E − 06

0.671855218

1.09E − 31

1.27E − 29

0.587017756

8.71E − 23

4.75E − 21

Triggering receptor expressed on myeloid cells 2

TREM2

0.373694844

7.83E − 09

1.18E − 05

0.530656961

3.52E − 18

1.78E − 16

0.604674853

2.02E − 24

1.25E − 22

Liver carboxylesterase 1

CES1

0.356670727

4.02E − 08

5.07E − 05

0.448577921

7.77E − 13

2.80E − 11

0.527103123

6.44E − 18

2.59E − 16

Growth hormone receptor

GHR

0.335558675

2.69E − 07

0.00029

0.385316632

1.36E − 09

3.61E − 08

0.302256959

2.88E − 06

3.74E − 05

Fructose-bisphosphate aldolase B

ALDOB

0.330400022

4.19E − 07

0.000396

0.80853585

1.19E − 54

1.29E − 51

0.810245363

4.74E − 55

3.98E − 52

Fructose-1,6-bisphosphatase 1

FBP1

0.327926709

5.17E − 07

0.000434

0.835018717

2.41E − 61

3.64E − 58

0.834973375

2.48E − 61

4.69E − 58

Isocitrate dehydrogenase [NADP] cytoplasmic

IDH1

0.323776583

7.32E − 07

0.000553

0.802659153

2.63E − 53

1.99E − 50

0.797621328

3.45E − 52

1.53E − 49

Argininosuccinate lyase

ASL

0.319550116

1.04E − 06

0.000713

0.867639716

1.94E − 71

1.46E − 67

0.879476202

8.65E − 76

6.54E − 72

Protein CREG1

CREG1

0.315045318

1.50E − 06

0.000942

0.223326875

0.000628

0.005445

0.218135984

0.000845

0.005064

D-3-phosphoglycerate dehydrogenase

PHGDH

0.312976142

1.77E − 06

0.000988

0.599603375

6.09E − 24

4.65E − 22

0.560218275

1.74E − 20

8.36E − 19

Homogentisate 1,2-dioxygenase

HGD

0.30340178

3.75E − 06

0.001888

0.804074409

1.26E − 53

1.06E − 50

0.809965857

5.52E − 55

4.17E − 52

Retinol-binding protein 5

RBP5

0.290205694

1.01E − 05

0.00476

0.686814729

1.42E − 33

1.98E − 31

0.738785228

4.04E − 41

6.78E − 39

Acyl-CoA-binding domain-containing protein 4

ACBD4

0.289448319

1.07E − 05

0.00476

0.599249974

6.58E − 24

4.97E − 22

0.587005868

8.73E − 23

4.75E − 21

3-oxo-5-beta-steroid 4-dehydrogenase

AKR1D1

0.287554075

1.23E − 05

0.005162

0.758391319

1.87E − 44

7.45E − 42

0.697247883

5.84E − 35

6.13E − 33

Alcohol dehydrogenase 1A

ADH1A

0.284902381

1.49E − 05

0.005797

0.797983014

2.87E − 52

1.81E − 49

0.788571466

2.93E − 50

9.23E − 48

Aldo–keto reductase family 1 member C4

AKR1C4

0.284494522

1.53E − 05

0.005797

0.711549658

5.87E − 37

1.20E − 34

0.713493397

3.07E − 37

3.69E − 35

Fumarylacetoacetase

FAH

0.283299772

1.67E − 05

0.006015

0.821976159

6.57E − 58

8.28E − 55

0.789985065

1.48E − 50

4.88E − 48

NADP-dependent malic enzyme

ME1

0.282572748

1.76E − 05

0.006048

0.678149386

1.81E − 32

2.28E − 30

0.769616366

1.65E − 46

4.15E − 44

Aminoacylase-1

ACY1

0.278368168

2.37E − 05

0.0064

0.845897458

1.90E − 64

4.78E − 61

0.839358271

1.49E − 62

3.74E − 59

Phosphoserine aminotransferase

PSAT1

0.279096795

2.25E − 05

0.0064

0.808174611

1.44E − 54

1.37E − 51

0.800800588

6.86E − 53

3.46E − 50

UDP-N-acetylhexosamine pyrophosphorylase

UAP1

0.278636873

2.33E − 05

0.0064

0.614184774

2.41E − 25

2.04E − 23

0.58358711

1.76E − 22

9.52E − 21

Triggering receptor expressed on myeloid cells 2

TREM2

0.280610785

2.02E − 05

0.0064

0.520291431

2.01E − 17

9.61E − 16

0.61668446

1.36E − 25

9.26E − 24

Apolipoprotein F

APOF

− 0.2792404

2.23E − 05

0.0064

− 0.34398468

8.12E − 08

1.68E − 06

− 0.23217121

0.000373

0.002551

Heme oxygenase 1

HMOX1

0.280503482

2.04E − 05

0.0064

0.250835306

0.000116

0.001279

0.197168187

0.002612

0.012552

Pterin-4-alpha-carbinolamine dehydratase

PCBD1

0.276958204

2.62E − 05

0.006821

0.79803608

2.80E − 52

1.81E − 49

0.817121992

1.06E − 56

1.14E − 53

Alcohol dehydrogenase 1C

ADH1C

0.275300075

2.94E − 05

0.007401

0.790550849

1.13E − 50

6.10E − 48

0.799060249

1.67E − 52

7.87E − 50

Glycine amidinotransferase, mitochondrial

GATM

0.272723002

3.51E − 05

0.007915

0.738512246

4.47E − 41

1.30E − 38

0.824321179

1.66E − 58

2.10E − 55

Alcohol dehydrogenase 4

ADH4

0.272579591

3.54E − 05

0.007915

0.732598856

3.95E − 40

1.07E − 37

0.707400749

2.29E − 36

2.63E − 34

Lambda-crystallin homolog

CRYL1

0.271923032

3.71E − 05

0.007915

0.710756448

7.63E − 37

1.48E − 34

0.686881488

1.39E − 33

1.28E − 31

L-lactate dehydrogenase A chain

LDHA

0.271453174

3.83E − 05

0.007915

0.589570343

5.13E − 23

3.56E − 21

0.649572687

4.49E − 29

3.53E − 27

Beta-enolase

ENO3

0.271280326

3.87E − 05

0.007915

0.368824126

7.46E − 09

1.81E − 07

0.323886772

4.85E − 07

7.26E − 06

Dihydropteridine reductase

QDPR

0.269650445

4.33E − 05

0.008402

0.752168231

2.31E − 43

8.74E − 41

0.719388522

4.18E − 38

5.64E − 36

Receptor-type tyrosine-protein phosphatase eta

PTPRJ

0.268623415

4.64E − 05

0.008556

0.358050862

2.15E − 08

4.82E − 07

0.343775001

8.28E − 08

1.44E − 06

Interleukin-1 receptor antagonist protein

IL1RN

0.267817819

4.90E − 05

0.00882

0.314495701

1.07E − 06

1.80E − 05

0.325176788

4.34E − 07

6.55E − 06

S-adenosylmethionine synthase isoform type-1

MAT1A

0.267146631

5.13E − 05

0.009013

0.783401054

3.37E − 49

1.70E − 46

0.771114507

8.58E − 47

2.32E − 44

Glutathione S-transferase A1

GSTA1

0.26546608

5.74E − 05

0.009639

0.707254231

2.41E − 36

4.23E − 34

0.729120905

1.38E − 39

2.01E − 37

L-xylulose reductase

DCXR

0.264219014

6.24E − 05

0.010246

0.840785387

5.83E − 63

1.10E − 59

0.814836762

3.81E − 56

3.60E − 53

Beta-hexosaminidase subunit beta

HEXB

0.261614978

7.41E − 05

0.011664

0.25250573

0.000104

0.001161

0.32842609

3.27E − 07

5.08E − 06

Ectonucleotide pyrophosphatase/phosphodiesterase family member 7

ENPP7

0.259711744

8.39E − 05

0.012734

0.371014271

5.98E − 09

1.48E − 07

0.496016218

9.49E − 16

3.48E − 14

Acid sphingomyelinase-like phosphodiesterase 3a

SMPDL3A

0.259652092

8.42E − 05

0.012734

0.193454719

0.003155

0.020022

0.16994905

0.009658

0.034317

Serine hydroxymethyltransferase, cytosolic

SHMT1

0.254391561

0.000118

0.017301

0.710188544

9.21E − 37

1.70E − 34

0.743855232

5.93E − 42

1.25E − 39

Protein tyrosine phosphatase type IVA 1

PTP4A1

0.254298206

0.000119

0.017301

0.616451411

1.43E − 25

1.23E − 23

0.599371344

6.41E − 24

3.78E − 22

Aldehyde dehydrogenase, mitochondrial

ALDH2

0.253070688

0.000129

0.018355

0.621105679

4.89E − 26

4.45E − 24

0.609055501

7.64E − 25

5.02E − 23

Homeodomain-interacting protein kinase 3

HIPK3

− 0.25242533

0.000134

0.018768

− 0.19749869

0.002568

0.017037

− 0.17062249

0.00937

0.033616

Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial

ALDH6A1

0.251376926

0.000143

0.019339

0.628657183

8.20E − 27

7.95E − 25

0.571142528

2.13E − 21

1.07E − 19

Ribonucleoside-diphosphate reductase subunit M2 B

RRM2B

0.251522666

0.000142

0.019339

0.35911013

1.94E − 08

4.40E − 07

0.400111974

2.72E − 10

6.57E − 09

Ribonuclease UK114

RIDA

0.25047459

0.000152

0.019539

0.706938269

2.67E − 36

4.48E − 34

0.738028093

5.35E − 41

8.61E − 39

Cytosolic endo-beta-N-acetylglucosaminidase

ENGASE

0.250384838

0.000153

0.019539

0.418578938

3.26E − 11

1.02E − 09

0.37826347

2.85E − 09

6.24E − 08

Retinal dehydrogenase 2

ALDH1A2

0.250401453

0.000152

0.019539

0.265350096

4.42E − 05

0.00054

0.243968168

0.000181

0.001388

Sorbitol dehydrogenase

SORD

0.247063842

0.000188

0.02364

0.696525157

7.32E − 35

1.13E − 32

0.698453144

4.01E − 35

4.33E − 33

Cysteine-rich motor neuron 1 protein:Extracellular domain

CRIM1

0.245704199

0.000204

0.024106

0.607493418

1.08E − 24

8.52E − 23

0.677873576

1.96E − 32

1.68E − 30

Visinin-like protein 1

VSNL1

0.245716276

0.000204

0.024106

0.42666648

1.23E − 11

4.09E − 10

0.328867909

3.15E − 07

4.91E − 06

Oxysterol-binding protein 1

OSBP

0.241529764

0.000263

0.028447

0.233156554

0.000352

0.003332

0.198553005

0.002432

0.011914

Fructose-bisphosphate aldolase C

ALDOC

0.241132802

0.00027

0.028729

0.710019993

9.73E − 37

1.75E − 34

0.739067233

3.63E − 41

6.24E − 39

Glutathione S-transferase A1

GSTA1

0.240883495

0.000274

0.02876

0.717107959

9.10E − 38

2.02E − 35

0.742186599

1.12E − 41

2.21E − 39

Hsp90alpha

HSP90AA1

0.238706595

0.000312

0.031473

0.688899321

7.57E − 34

1.10E − 31

0.693737425

1.73E − 34

1.72E − 32

Espin

None

0.237517921

0.000335

0.032079

0.619676942

6.81E − 26

5.99E − 24

0.565807181

5.99E − 21

2.94E − 19

Valacyclovir hydrolase

BPHL

0.237716409

0.000331

0.032079

0.290721845

7.05E − 06

0.000104

0.283378633

1.22E − 05

0.000134

Formimidoyltransferase-cyclodeaminase

FTCD

0.237071294

0.000344

0.032531

0.640568739

4.44E − 28

4.47E − 26

0.691414362

3.53E − 34

3.47E − 32

Enoyl-CoA hydratase, mitochondrial

ECHS1

0.235330749

0.000382

0.035621

0.685167734

2.31E − 33

3.18E − 31

0.749298605

7.19E − 43

1.65E − 40

Leukocyte cell-derived chemotaxin-2

LECT2

0.235121685

0.000386

0.035623

0.176135871

0.007285

0.037007

0.171236935

0.009114

0.032979

UDP-glucose 6-dehydrogenase

UGDH

0.230756418

0.000499

0.044609

0.730634927

8.03E − 40

1.96E − 37

0.784265416

2.25E − 49

6.80E − 47

Cathepsin D

CTSD

0.230657123

0.000502

0.044609

0.296082124

4.68E − 06

7.12E − 05

0.43401553

4.99E − 12

1.36E − 10

Afamin

AFM

0.229650821

0.000532

0.045667

0.303492868

2.61E − 06

4.23E − 05

0.299998193

3.45E − 06

4.39E − 05

Cathepsin Z

CTSZ

0.229901852

0.000524

0.045667

0.212423641

0.001161

0.009041

0.25078211

0.000117

0.000963

NADPH–cytochrome P450 reductase

POR

0.228812148

0.000558

0.046196

0.797136391

4.40E − 52

2.56E − 49

0.825376674

8.90E − 59

1.35E − 55

3-hydroxybutyrate dehydrogenase type 2

BDH2

0.228943329

0.000554

0.046196

0.613799325

2.63E − 25

2.21E − 23

0.624077706

2.44E − 26

1.74E − 24

Lysosomal alpha-glucosidase

GAA

0.22848917

0.000568

0.046196

0.430491061

7.72E − 12

2.59E − 10

0.519682205

2.22E − 17

8.61E − 16

Hydroxymethylglutaryl-CoA synthase, mitochondrial

HMGCS2

0.227816233

0.000591

0.0475

0.477895308

1.39E − 14

5.51E − 13

0.541941937

4.92E − 19

2.08E − 17