Table 3 Classification accuracy using various gene subsets.
Selected gene subsets | Fivefold CV accuracy (%) ± std | Friedman test accuracy (%) ± std |
|---|---|---|
SRBCT | ||
 42,1003,1954,430,2050,123 | 100 ± 0.00 | 100 ± 0.00 |
 545,1955,1434,509,971,255 | 100 ± 0.00 | 100 ± 0.00 |
 1003,545,1911,153,123,1489,2161 | 100 ± 0.00 | 100 ± 0.00 |
 1955,2050,545,2144,2045,123,1489 | 100 ± 0.00 | 100 ± 0.00 |
Leukemia | ||
 4050,2642,2121 | 100 ± 0.00 | 100 ± 0.00 |
 4050,2642,1882 | 100 ± 0.00 | 100 ± 0.00 |
 4050,2642,3258 | 100 ± 0.00 | 100 ± 0.00 |
 42,335,2642,1843,4050 | 100 ± 0.00 | 100 ± 0.00 |
Lymphoma | ||
 152,2347,2650,5679,438,1855,5863 | 90.60 ± 0.023 | 86.11 ± 0.120 |
 1855,2828,152,2437,806,530,1102 | 92.36 ± 0.027 | 89.33 ± 0.019 |
 5279,4687,4940,5449,1133,1855,4519 | 93.51 ± 0.022 | 90.47 ± 0.029 |
 152,2437,4829,2828,6441,806,2508 | 93.79 ± 0.020 | 90.45 ± 0.023 |
LUNG | ||
 1765,2779,2841,1474,2045,3191,2763,2817,525,1630 | 98.27 ± 0.014 | 93.33 ± 0.011 |
 525,1493,607,2763,792,580,867,368,3279,2158,1225 | 98.39 ± 0.023 | 93.47 ± 0.012 |
 1765,883,2763,792,580,867,985,3279,2988,2045,814 | 98.67 ± 0.021 | 93.60 ± 0.019 |
 1765,525,2763,2841,1474,2583,867,985,2045,814,918 | 98.67 ± 0.019 | 94.01 ± 0.024 |
Brain cancer | ||
 1091,798,337 | 90.14 ± 0.036 | 89.62 ± 0.025 |
 3052,973,3041,3692,4796 | 92.00 ± 0.023 | 91.78 ± 0.046 |
 4628,7129,7045,4413,798 | 92.29 ± 0.020 | 90.22 ± 0.022 |
 7129,2881,3052,865,1970,2935,4871 | 92.78 ± 0.012 | 91.88 ± 0.019 |
Colon | ||
 1976,1325,1993,1870,1892,653,1917,187,22,1209,1060 | 93.63 ± 0.025 | 97.27 ± 0.013 |
 377,792,14,1976,765,187,251,1110,175,53,1293,1740,200 | 93.00 ± 0.035 | 98.06 ± 0.013 |
 792,1423,14,1976,1909,1110,1589,102,107,1916,175,1151 | 93.73 ± 0.031 | 98.71 ± 0.013 |
 792,14,1976,765,1909,1524,1110,175,43,53,1293,1740,251 | 96.86 ± 0.033 | 99.05 ± 0.011 |
11_Tumors | ||
 2131,1291,1798,1337 | 95.63 ± 0.025 | 95.27 ± 0.012 |
 3052,973,3041,3692,4796 | 95.00 ± 0.035 | 97.66 ± 0.015 |
 4628,7129,7045,4413,798 | 95.73 ± 0.031 | 95.71 ± 0.016 |
 7129,2881,3052,865,1970,2935,4871 | 95.86 ± 0.033 | 94.05 ± 0.004 |
DLBCL | ||
 1291,798,437,2345 | 100 ± 0.00 | 100 ± 0.00 |
 2052,2973,3041,3692,4796 | 100 ± 0.00 | 100 ± 0.00 |
 4628,7129,7245,7413,8798 | 100 ± 0.00 | 100 ± 0.00 |
 7139,4831,3052,865,1970,3932,5871 | 100 ± 0.00 | 100 ± 0.00 |
SRBCT | ||
 42,1003,1954,430,2050,123 | 100 ± 0.00 | 100 ± 0.00 |
 545,1955,1434,509,971,255 | 100 ± 0.00 | 100 ± 0.00 |
 1003,545,1911,153,123,1489,2161 | 100 ± 0.00 | 100 ± 0.00 |
 1955,2050,545,2144,2045,123,1489 | 100 ± 0.00 | 100 ± 0.00 |
Leukemia | ||
 4050,2642,2121 | 100 ± 0.00 | 100 ± 0.00 |
 4050,2642,1882 | 100 ± 0.00 | 100 ± 0.00 |
 4050,2642,3258 | 100 ± 0.00 | 100 ± 0.00 |
 42,335,2642,1843,4050 | 100 ± 0.00 | 100 ± 0.00 |
Lymphoma | ||
 152,2347,2650,5679,438,1855,5863 | 90.60 ± 0.023 | 85.11 ± 0.020 |
 1855,2828,152,2437,806,530,1102 | 92.36 ± 0.027 | 89.33 ± 0.019 |
 5279,4687,4940,5449,1133,1855,4519 | 93.51 ± 0.022 | 90.47 ± 0.029 |
 152,2437,4829,2828,6441,806,2508 | 93.79 ± 0.020 | 90.45 ± 0.023 |
LUNG | Â | Â |
 1765,2779,2841,1474,2045,3191,2763,2817,525,1630 | 98.27 ± 0.014 | 93.33 ± 0.011 |
 525,1493,607,2763,792,580,867,368,3279,2158,1225 | 98.39 ± 0.023 | 93.47 ± 0.012 |
 1765,883,2763,792,580,867,985,3279,2988,2045,814 | 98.67 ± 0.021 | 93.60 ± 0.019 |
 1765,525,2763,2841,1474,2583,867,985,2045,814,918 | 98.67 ± 0.019 | 94.01 ± 0.024 |
Brain cancer | ||
 1091,798,337 | 90.14 ± 0.036 | 89.62 ± 0.025 |
 3052,973,3041,3692,4796 | 92.00 ± 0.023 | 91.78 ± 0.046 |
 4628,7129,7045,4413,798 | 92.29 ± 0.020 | 90.22 ± 0.022 |
 7129,2881,3052,865,1970,2935,4871 | 92.78 ± 0.012 | 91.88 ± 0.019 |
Colon | ||
 1976,1325,1993,1870,1892,653,1917,187,22,1209,1060 | 93.63 ± 0.025 | 97.27 ± 0.013 |
 377,792,14,1976,765,187,251,1110,175,53,1293,1740,200 | 93.00 ± 0.035 | 98.06 ± 0.013 |
 792,1423,14,1976,1909,1110,1589,102,107,1916,175,1151 | 93.73 ± 0.031 | 98.71 ± 0.013 |
 792,14,1976,765,1909,1524,1110,175,43,53,1293,1740,251 | 96.86 ± 0.033 | 99.05 ± 0.011 |
Tumors | ||
 2131,1291,1798,1337 | 95.63 ± 0.025 | 96.27 ± 0.012 |
 3052,973,3041,3692,4796 | 95.00 ± 0.035 | 96.06 ± 0.015 |
 4628,7129,7045,4413,798 | 95.73 ± 0.031 | 96.71 ± 0.016 |
 7129,2881,3052,865,1970,2935,4871 | 95.86 ± 0.033 | 95.05 ± 0.013 |
DLBCL | ||
 1291,798,437,2345 | 100 ± 0.00 | 100 ± 0.00 |
 2052,2973,3041,3692,4796 | 100 ± 0.00 | 100 ± 0.00 |
 4628,7129,7245,7413,8798 | 100 ± 0.00 | 100 ± 0.00 |
 7139,4831,3052,865,1970,3932,5871 | 100 ± 0.00 | 100 ± 0.00 |
