Table 1 Published microbiome datasets analyzed.
Dataset role | NCBI BioProject ID | References | CRC cases | Adenoma cases* | Healthy controls | Median sequencing depth |
|---|---|---|---|---|---|---|
Training data | PRJEB10878 | Yu et al.11 | 75 | 0 | 53 | 56.2 M reads/sample |
Training data | PRJEB6070 | Zeller et al.9 | 91 | 42 | 66 | 58.0 M reads/sample |
Training data | PRJEB7774 | Feng et al.10 | 46 | 47 | 63 | 52.7 M reads/sample |
Test data (validation) | PRJDB4176 | Yachida et al.12 | 258 | 0 | 251 | 46.3 M reads/sample |
