Table 3 Binding free energy components for the 1NME with butin complex calculated by MM-GBSA.
Energies (kcal/mol) | 1NME_butin | 1NME_butin2 | 1NME_butin3 | Average |
---|---|---|---|---|
ΔGbind | − 36.5 | − 1.13 | − 8.53 | − 15.3867 ± 8.65 |
ΔGbindCoulomb | − 12.08 | − 0.96 | − 1.83 | − 4.95667 ± 2.18 |
ΔGbindCovalent | 0.33 | 0.04 | 0.11 | 0.16 ± 0.15 |
ΔGbindHbond | − 0.86 | − 0.05 | − 0.17 | − 0.36 ± 0.43 |
ΔGbind Lipo | − 12.85 | − 0.33 | − 2.66 | − 5.28 ± 0.66 |
ΔGbindSolvGB | 11.21 | 1.35 | 4.14 | 5.566667 ± 0.69 |
ΔGbindvdW | − 19.27 | − 1.18 | − 7.94 | − 9.46333 ± 3.14 |