Table 4 List of VZV nucleotide mutation of gK, gN and gB.
Gene | Nucleotide number of SNP | Site and change in nucleotides | Amino acids with change in amino acid | Other sequenced viruses with same SNP | |||
|---|---|---|---|---|---|---|---|
Selected reference sequence | Samples from Jilin Province | ||||||
Proportion | Strains | Proportion | Strains | ||||
gK | 7 | C8T | No | 1/9 | pOka | 0 | None |
G152A | No | 1/9 | 03-500 | 0 | None | ||
C170T* | No | 0 | None | 1/38 | VZV11-3 | ||
A190G | No | 1/9 | YC01 | 0 | None | ||
A298G* | No | 0 | None | 1/38 | VZV23-2 | ||
T554G* | No | 0 | None | 5/38 | VZV10-16,VZV11-3,VZV12-1, VZV14-2, VZV17-6 | ||
A602C* | No | 0 | None | 2/38 | VZV13-3, VZV14-2 | ||
gN | 3 | C66T* | No | 0 | None | 1/38 | VZV20-4 |
C195T* | No | 0 | None | 1/38 | VZV20-4 | ||
T259Y(C/T) | No | 1/9 | Baike | 0 | None | ||
gB | 9 | A217C | T73P | 4/9 | pOka, YC01,Baike, Pasadena.USA | 38/38 | All |
A294C | No | 7/9 | pOka, YC01, Baike, M2DR, CA123, Pasadena.USA,1483–2005 | 38/38 | All | ||
G390T | No | 4/9 | pOka, YC01, Baike, Pasadena.USA | 38/38 | All | ||
C627T* | No | 0 | None | 3/38 | VZV12-5,VZV14-4,VZV16-5 | ||
C948T | No | 3/9 | M2DR, CA123,1483–2005 | 0 | None | ||
C1542T | No | 1/9 | YC01 | 0 | None | ||
A1588G | I530V | 2/9 | Baike, Pasadena.USA | 0 | None | ||
A2280G | No | 1/9 | Baike | 0 | None | ||
T2349C* | No | 0 | None | 3/38 | VZV10-14,VZV10-16,VZV12-1 | ||
