Table 6 List of VZV nucleotide mutation of gL, gI and gE.
Gene | Nucleotide number of SNP | Site and change in nucleotides | Amino acids with change in amino acid | Other sequenced viruses with same SNP | |||
|---|---|---|---|---|---|---|---|
Selected reference sequence | Samples from Jilin Province | ||||||
Proportion | Strains | Proportion | Strains | ||||
gL | 9 | A76G* | No | 0 | None | 2/38 | VZV14-6, VZV22-2 |
G121A* | No | 0 | None | 2/38 | VZV14-12, VZV21-4 | ||
C162T | A108T | 4/9 | pOka, YC01,Baike, Pasadena.USA | 38/38 | All | ||
T184A | No | 1/9 | 457–2008 | 0 | None | ||
C295A | No | 1/9 | CA123 | 0 | None | ||
455–457: ATC, (insert) | M, insert | 6/9 | pOka, YC01, Baike, M2DR, Pasadena.USA,1483–2005 | 38/38 | All | ||
C460T | No | 1/9 | 03-500 | 0 | None | ||
gI | 8 | A92G | Q31R | 0 | None | 5/38 | VZV10-14, VZV10-16, VZV12-1, VZV17-6, VZV23-1 |
A213C | No | 1/9 | M2DR | 0 | None | ||
T239C* | V80A | 0 | None | 1/38 | VZV23-1 | ||
A460C* | No | 0 | None | 1/38 | VZV22-2 | ||
G546A | No | 6/9 | pOka, YC01, Baike, M2DR, Pasadena.USA,457–2008 | 38/38 | All | ||
A632C | T211P | 1/9 | 1483–2005 | 0 | None | ||
C776T* | S259F | 0 | None | 1/38 | VZV14-10 | ||
A800R | N267? | 1/9 | Baike | 0 | None | ||
gE | 8 | T23C* | V8A | 0 | None | 1/38 | VZV21-1 |
C119T | T40I | 9/9 | All | 38/38 | All | ||
T485G | L162R | 1/9 | 1483–2005 | 0 | None | ||
T660C | No | 3/9 | 03-500,CA123,457–2008 | 0 | None | ||
T1062G | No | 1/9 | CA123 | 0 | None | ||
C1606A | L536I | 2/9 | 03-500,457–2008 | 0 | None | ||
G1759R | V587? | 1/9 | Baike | 0 | None | ||
G1869A* | No | 0 | None | 1/38 | VZV20-4 | ||
