Table 1 Information and protein secondary structure analysis of MdHSP70 gene family.
Gene ID | Gene name | Full length (bp) | Length of CDS (bp) | Length of amino acid (aa) | pI | Molecular weight (kD) | Alpha helix (%) | Beta turn (%) | Random coil (%) |
---|---|---|---|---|---|---|---|---|---|
MD01G1126500 | MdHSP70-1 | 2841 | 1950 | 649 | 5.12 | 71.13568 | 42.99 | 7.09 | 31.74 |
MD01G1126900 | MdHSP70-2 | 543 | 543 | 180 | 8.64 | 10.67124 | 37.22 | 9.44 | 34.44 |
MD01G1127100 | MdHSP70-3 | 449 | 372 | 123 | 5.07 | 13.6977 | 12.2 | 9.76 | 46.34 |
MD01G1127200 | MdHSP70-4 | 5388 | 2508 | 835 | 6.54 | 92.29032 | 35.93 | 6.35 | 36.05 |
MD01G1127400 | MdHSP70-5 | 2221 | 1710 | 569 | 7.92 | 62.54622 | 31.81 | 7.03 | 36.91 |
MD01G1127500 | MdHSP70-6 | 1926 | 1578 | 525 | 6.36 | 57.77998 | 34.29 | 8.00 | 35.05 |
MD01G1127600 | MdHSP70-7 | 1357 | 735 | 244 | 6.33 | 26.5071 | 31.56 | 10.25 | 31.97 |
MD01G1127700 | MdHSP70-8 | 662 | 639 | 212 | 4.97 | 22.79504 | 27.36 | 8.96 | 40.57 |
MD01G1128200 | MdHSP70-9 | 8806 | 2409 | 802 | 6.47 | 89.82163 | 39.03 | 11.97 | 25.31 |
MD01G1128400 | MdHSP70-10 | 381 | 381 | 126 | 9.32 | 14.72206 | 34.13 | 3.97 | 34.92 |
MD01G1128500 | MdHSP70-11 | 525 | 525 | 174 | 6.09 | 19.11412 | 28.16 | 9.77 | 35.63 |
MD01G1128600 | MdHSP70-12 | 956 | 546 | 181 | 5.95 | 20.44561 | 35.91 | 8.29 | 33.70 |
MD01G1128700 | MdHSP70-13 | 399 | 399 | 132 | 8.42 | 14.7001 | 24.24 | 6.82 | 42.42 |
MD01G1128800 | MdHSP70-14 | 368 | 327 | 108 | 5.1 | 12.17269 | 9.26 | 8.33 | 46.30 |
MD01G1129500 | MdHSP70-15 | 1525 | 1254 | 417 | 5.53 | 45.8121 | 36.69 | 10.31 | 32.37 |
MD01G1129700 | MdHSP70-16 | 1066 | 987 | 328 | 5.15 | 36.52553 | 32.93 | 8.84 | 34.76 |
MD01G1129800 | MdHSP70-17 | 2448 | 1593 | 530 | 6.26 | 58.42889 | 34.15 | 7.92 | 34.91 |
MD01G1130000 | MdHSP70-18 | 273 | 273 | 90 | 6.7 | 9.69345 | 27.78 | 11.11 | 40.00 |
MD01G1130100 | MdHSP70-19 | 489 | 489 | 162 | 5.01 | 18.24513 | 32.72 | 5.56 | 39.51 |
MD01G1130300 | MdHSP70-20 | 928 | 621 | 206 | 7.83 | 22.6528 | 30.58 | 7.77 | 36.41 |
MD01G1133300 | MdHSP70-21 | 982 | 957 | 318 | 6.47 | 35.18613 | 35.22 | 8.18 | 34.28 |
MD01G1133400 | MdHSP70-22 | 16,618 | 1557 | 518 | 5.52 | 56.57718 | 35.91 | 8.88 | 32.05 |
MD02G1005800 | MdHSP70-23 | 1962 | 1962 | 653 | 5.21 | 71.44106 | 43.49 | 7.20 | 30.32 |
MD02G1315900 | MdHSP70-24 | 10,382 | 2466 | 821 | 6.24 | 92.02934 | 41.66 | 6.09 | 37.39 |
MD04G1201500 | MdHSP70-25 | 3573 | 942 | 313 | 8.49 | 34.97121 | 45.69 | 7.99 | 30.35 |
MD05G1038000 | MdHSP70-26 | 591 | 591 | 196 | 7.77 | 21.34206 | 31.12 | 12.24 | 29.59 |
MD05G1049700 | MdHSP70-27 | 3148 | 2031 | 676 | 5.79 | 72.78052 | 43.49 | 6.66 | 30.18 |
MD06G1113000 | MdHSP70-28 | 4015 | 2004 | 667 | 5.17 | 73.57629 | 45.58 | 6.75 | 29.84 |
MD07G1116300 | MdHSP70-29 | 288 | 288 | 95 | 9.35 | 10.39614 | 30.53 | 10.53 | 26.32 |
MD07G1196600 | MdHSP70-30 | 3938 | 861 | 286 | 10.19 | 32.48961 | 21.33 | 6.99 | 46.85 |
MD07G1196700 | MdHSP70-31 | 2161 | 1722 | 573 | 8.2 | 63.90818 | 46.07 | 7.33 | 29.84 |
MD07G1197000 | MdHSP70-32 | 177 | 177 | 58 | 4.91 | 6.69145 | 100.00 | 0.00 | 0.00 |
MD07G1197200 | MdHSP70-33 | 1896 | 1200 | 399 | 6.72 | 44.90254 | 34.59 | 8.27 | 36.34 |
MD07G1197700 | MdHSP70-34 | 1927 | 1524 | 507 | 5.82 | 55.57735 | 31.36 | 7.30 | 37.67 |
MD08G1205600 | MdHSP70-35 | 2854 | 1782 | 593 | 9.06 | 65.6409 | 34.23 | 7.25 | 36.09 |
MD08G1250700 | MdHSP70-36 | 231 | 231 | 76 | 9.63 | 8.2356 | 44.74 | 9.21 | 32.89 |
MD09G1212600 | MdHSP70-37 | 5301 | 2568 | 855 | 5.17 | 96.61861 | 43.51 | 2.81 | 39.88 |
MD09G1218100 | MdHSP70-38 | 360 | 360 | 119 | 4.62 | 12.75891 | 77.31 | 2.52 | 20.17 |
MD09G1218200 | MdHSP70-39 | 6860 | 1128 | 375 | 6.95 | 40.52351 | 32.53 | 6.67 | 37.33 |
MD12G1025700 | MdHSP70-40 | 3654 | 1641 | 546 | 7.1 | 60.26688 | 32.78 | 8.79 | 34.43 |
MD12G1025800 | MdHSP70-41 | 3797 | 1533 | 510 | 5.79 | 55.90361 | 30.00 | 7.84 | 37.65 |
MD12G1025900 | MdHSP70-42 | 606 | 606 | 201 | 5.95 | 22.09036 | 24.38 | 7.46 | 41.79 |
MD12G1215200 | MdHSP70-43 | 3317 | 1989 | 662 | 5.2 | 73.48552 | 44.26 | 6.80 | 30.66 |
MD14G1024500 | MdHSP70-44 | 4803 | 1542 | 513 | 5.66 | 56.58745 | 34.11 | 7.80 | 33.92 |
MD14G1024700 | MdHSP70-45 | 1259 | 948 | 315 | 6.45 | 34.22305 | 45.71 | 6.98 | 33.33 |
MD15G1150500 | MdHSP70-46 | 1968 | 1869 | 622 | 4.94 | 68.7431 | 45.02 | 6.11 | 31.67 |
MD15G1436200 | MdHSP70-47 | 3815 | 2088 | 695 | 5.11 | 74.07873 | 39.42 | 6.62 | 32.66 |
MD16G1192600 | MdHSP70-48 | 2673 | 1749 | 582 | 5.42 | 62.46004 | 33.51 | 6.36 | 38.66 |
MD16G1239900 | MdHSP70-49 | 792 | 792 | 263 | 8.6 | 29.51759 | 48.29 | 7.98 | 27.00 |
MD17G1127600 | MdHSP70-50 | 7612 | 2676 | 891 | 5.47 | 99.48334 | 47.70 | 2.92 | 37.37 |
MD17G1201200 | MdHSP70-51 | 3480 | 2040 | 679 | 5.78 | 72.66439 | 45.07 | 6.63 | 28.42 |
MD17G1225800 | MdHSP70-52 | 246 | 222 | 73 | 4.49 | 7.54344 | 53.42 | 8.22 | 35.62 |
MD17G1226100 | MdHSP70-53 | 1971 | 1971 | 656 | 5.26 | 72.10454 | 41.16 | 6.55 | 34.60 |
MD17G1263000 | MdHSP70-54 | 462 | 462 | 153 | 5.12 | 16.50985 | 35.95 | 10.46 | 32.03 |
MD00G1176700 | MdHSP70-55 | 876 | 876 | 291 | 6.46 | 31.71715 | 29.55 | 12.03 | 27.15 |
MD00G1207500 | MdHSP70-56 | 654 | 654 | 217 | 5.06 | 23.64796 | 29.95 | 7.37 | 39.17 |