Fig. 2

DEGs and gene module information. (A) The statistical graph of differential expression shows different comparison groups on the x-axis and the corresponding number of upregulated and downregulated genes/transcripts on the y-axis, with red representing upregulation and blue rep-resenting downregulation. (B) The module membership statistical graph shows the number of members belonging to each module (represented by module colour) on the y-axis. (C) The module correlation graph shows the correlations between different modules. Red represents a higher cor-relation between modules, and green represents a lower correlation. (D) The module-phenotype correlation analysis graph shows different phenotypes/samples/groups on the x-axis and different modules on the y-axis. The number of genes/transcripts for each module is displayed in the left column, and each group of data on the right represents the correlation coefficient and significance P value (in parentheses) between the module and phenotype. A larger absolute value indicates a stronger correlation, with blue representing a negative correlation and red representing a positive correlation, as indicated by the colour scale in the lower right corner.