Table 1 Screening of CTL epitopes.

From: Development of a novel multi-epitope subunit mRNA vaccine candidate to combat Acinetobacter baumannii

Protein

Supertype

Comb Score

Epitope Sequence

Start Position

Antigenicity

Immunogenicity

Allergic

Toxicity

MHC alle

Score

RANK

Conservatism

omp33-36

A2

1.2892

AMLLPNFLV

140

1.652

0.06067

-

-

HLA-A*02:01

0.487874

0.27

73.50%

  

HLA-A*02:06

0.325128

0.52

A2

1.0778

MLLPNFLVA

141

1.8157

0.1039

-

-

HLA-A*02:01

0.43892

0.32

74%

  

HLA-A*02:06

0.431263

0.34

  

HLA-A*02:03

0.303221

0.49

A3

0.7553

TAQGTYYFK

43

0.6349

0.0961

-

-

HLA-A*68:01

0.737512

0.27

76.60%

  

HLA-A*11:01

0.683033

0.15

  

HLA-A*30:01

0.280933

0.47

A2

1.3642

YLPTPYLPV

101

1.5300

0.00534

-

-

HLA-A*02:01

0.612748

0.19

77.30%

  

HLA-A*02:03

0.609665

0.15

  

HLA-A*02:06

0.518073

0.23

ompA

B7

1.2584

APVEPTPVA

208

0.8366

0.15465

-

-

HLA-B*07:02

0.706448

0.12

86.60%

  

HLA-B*35:01

0.425488

0.3

  

HLA-B*51:01

0.227872

0.62

B7

1.4646

APVVEVAPV

202

0.7076

0.21784

-

-

HLA-B*07:02

0.706448

0.12

86.20%

  

HLA-B*35:01

0.425488

0.3

  

HLA-B*51:01

0.227872

0.62

A24

0.8155

TPLLLGYTF

27

0.7926

0.0259

-

-

HLA-B*35:01

0.931458

0.03

85.10%

B7

1.0154

HLA-B*53:01

0.858236

0.03

B8

0.8272

HLA-B*07:02

0.464045

0.28

  

HLA-B*51:01

0.395896

0.31

  

HLA-B*08:01

0.199931

0.59

ompW

A1

1.5173

FTAGFTYDF

308

1.267

0.20718

-

-

HLA-B*35:01

0.931458

0.03

79%

A26

0.9392

HLA-B*53:01

0.858236

0.03

B39

0.8421

HLA-B*07:02

0.464045

0.28

B58

1.3734

HLA-B*51:01

0.395896

0.31

B62

1.1451

HLA-B*08:01

0.199931

0.59

A1

0.7653

PIFTAGFTY

306

0.9135

0.26854

-

-

HLA-A*30:02

0.283861

0.5

77.30%

B62

0.8634

HLA-B*15:01

0.20238

0.94

B7

1.3126

SVRAWTPAI

218

0.879

0.32191

-

-

HLA-A*30:01

0.463672

0.16

79%

B62

1.042

HLA-B*07:02

0.26475

0.53

  

HLA-A*32:01

0.205096

0.37

B39

0.9493

VSAGWLHVM

31

0.4859

0.30348

-

-

HLA-B*57:01

0.52163

0.51

B58

1.2095

HLA-B*58:01

0.442387

0.38

88.30%

B62

0.9596

HLA-A*32:01

0.151002

0.5

  

HLA-B*35:01

0.107783

0.98

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