Table 10 Robustness evaluation in terms of Recall, Precision, and F-score. False interactions are randomly added to protein pairs.
Noise | Algorithm | Yeast-D1 | Yeast-D2 | ||||
---|---|---|---|---|---|---|---|
Recall | Precision | F-score | Recall | Precision | F-score | ||
10% | \(EA-CS\) | 0.4545 | 0.5196 | 0.4844 | 0.3130 | 0.3201 | 0.3159 |
\(EA-CS_{mu}\) | 0.5462 | 0.4965 | 0.5196 | 0.2769 | 0.2333 | 0.2529 | |
\(\text {MOEA/D}\) | 0.5407 | 0.5728 | 0.5362 | 0.2742 | 0.2828 | 0.2690 | |
\(\text {MOEA/D}_{mu}\) | 0.8231 | 0.6000 | 0.6835 | 0.4227 | 0.3079 | 0.3445 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9244 | 0.8766 | 0.8569 | 0.8833 | 0.7009 | 0.7579 | |
\(EA-CS\) | 0.3427 | 0.4534 | 0.3897 | 0.2388 | 0.2889 | 0.2607 | |
20% | \(EA-CS_{mu}\) | 0.4585 | 0.4440 | 0.4508 | 0.2053 | 0.1985 | 0.2014 |
\(\text {MOEA/D}\) | 0.4680 | 0.5652 | 0.4812 | 0.2362 | 0.2814 | 0.2423 | |
\(\text {MOEA/D}_{mu}\) | 0.8154 | 0.6060 | 0.6870 | 0.3927 | 0.2997 | 0.3284 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9231 | 0.9069 | 0.8801 | 0.8713 | 0.7266 | 0.7607 | |
\(EA-CS\) | 0.2713 | .04054 | 0.3242 | 0.1801 | 0.2552 | 0.2102 | |
30% | \(EA-CS_{mu}\) | 0.3726 | 0.4036 | 0.3867 | 0.1724 | 0.1920 | 0.1811 |
\(\text {MOEA/D}\) | 0.4154 | 0.5643 | 0.4348 | 0.2012 | 0.2909 | 0.2161 | |
\(\text {MOEA/D}_{mu}\) | 0.8128 | 0.6160 | 0.6896 | 0.3867 | 0.3006 | 0.3261 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9179 | 0.9096 | 0.8737 | 0.8933 | 0.7178 | 0.7683 | |
\(EA-CS\) | 0.1890 | 0.3217 | 0.2375 | 0.1310 | 0.2134 | 0.1612 | |
40% | \(EA-CS_{mu}\) | 0.3145 | 0.3593 | 0.3350 | 0.1413 | 0.1812 | 0.1586 |
\(\text {MOEA/D}\) | 0.3437 | 0.5218 | 0.3588 | 0.1610 | 0.2966 | 0.1767 | |
\(\text {MOEA/D}_{mu}\) | 0.8038 | 0.6012 | 0.6731 | 0.3853 | 0.211 | 0.3275 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9051 | 0.8465 | 0.8531 | 0.8820 | 0.6955 | 0.7633 | |
\(EA-CS\) | 0.1387 | 0.2669 | 0.1819 | 0.0942 | 0.1804 | 0.1229 | |
50% | \(EA-CS_{mu}\) | 0.2509 | 0.3097 | 0.2767 | 0.1076 | 0.1442 | 0.1224 |
\(\text {MOEA/D}\) | 0.3005 | 0.4735 | 0.3067 | 0.1406 | 0.2803 | 0.1494 | |
\(\text {MOEA/D}_{mu}\) | 0.7795 | 0.6009 | 0.6654 | 0.3727 | 0.3641 | 0.3185 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.8987 | 0.8336 | 0.8412 | 0.8933 | 0.7031 | 0.7663 |