Table 11 Robustness evaluation in terms of Recall, Precision, and F-score. False interactions are added to proteins of maximum number of interactions.
Noise | Algorithm | Yeast-D1 | Yeast-D2 | ||||
---|---|---|---|---|---|---|---|
Recall | Precision | F-score | Recall | Precision | F-score | ||
\(EA-CS\) | 0.4966 | 0.5368 | 0.5154 | 0.3426 | 0.3259 | 0.3335 | |
10% | \(EA-CS_{mu}\) | 0.5957 | 0.5295 | 0.5604 | 0.3236 | 0.2623 | 0.2894 |
\(\text {MOEA/D}\) | 0.5840 | 0.5805 | 0.5652 | 0.3072 | 0.2986 | 0.3462 | |
\(\text {MOEA/D}_{mu}\) | 0.8218 | 0.6049 | 0.6867 | 0.4427 | 0.2986 | 0.3462 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9410 | 0.7499 | 0.8183 | 0.8987 | 0.5584 | 0.6812 | |
\(EA-CS\) | 0.3827 | 0.5027 | 0.4338 | 0.2341 | 0.2890 | 0.2579 | |
20% | \(EA-CS_{mu}\) | 0.5111 | 0.4876 | 0.4988 | 0.2724 | 0.2552 | 0.2632 |
\(\text {MOEA/D}\) | 0.5023 | 0.5891 | 0.5118 | 0.2478 | 0.3066 | 0.2579 | |
\(\text {MOEA/D}_{mu}\) | 0.8167 | 0.6093 | 0.6834 | 0.4167 | 0.3032 | 0.3398 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9308 | 0.7326 | 0.8023 | 0.8960 | 0.5464 | 0.6728 | |
\(EA-CS\) | 0.2853 | 0.4568 | 0.3504 | 0.1619 | 0.2520 | 0.1964 | |
30% | \(EA-CS_{mu}\) | 0.4278 | 0.4598 | 0.4424 | 0.2138 | 0.2317 | 0.2219 |
\(\text {MOEA/D}\) | 0.4238 | 0.5633 | 0.4374 | 0.1940 | 0.3013 | 0.2107 | |
\(\text {MOEA/D}_{mu}\) | 0.8077 | 0.5802 | 0.6656 | 0.4173 | 0.2899 | .03372 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9397 | 0.7228 | 0.8021 | 0.8907 | 0.5380 | 0.6647 | |
\(EA-CS\) | 0.2049 | 0.4070 | 0.2718 | 0.1220 | 0.2334 | 0.1596 | |
40% | \(EA-CS_{mu}\) | 0.3786 | 0.4376 | 0.4055 | 0.1849 | 0.2267 | 0.2031 |
\(\text {MOEA/D}\) | 0.3562 | 0.5255 | 0.3662 | 0.1634 | 0.2944 | 0.1754 | |
\(\text {MOEA/D}_{mu}\) | 0.7949 | 0.5804 | 0.6565 | 0.4100 | 0.2987 | 0.3323 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9397 | 0.7091 | 0.7930 | 0.8973 | 0.5356 | 0.6658 | |
\(EA-CS\) | 0.1539 | 0.3624 | 0.2152 | 0.0900 | 0.2116 | 0.1255 | |
50% | \(EA-CS_{mu}\) | 0.3359 | 0.4257 | 0.3744 | 0.1398 | 0.2072 | 0.1664 |
\(\text {MOEA/D}\) | 0.3250 | 0.4639 | 0.3232 | 0.1542 | 0.2628 | 0.1564 | |
\(\text {MOEA/D}_{mu}\) | 0.8051 | 0.5683 | 0.6575 | 0.4020 | 0.2915 | 0.3300 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9295 | 0.7136 | 0.7970 | 0.8907 | 0.5249 | 0.6548 |