Table 11 Robustness evaluation in terms of Recall, Precision, and F-score. False interactions are added to proteins of maximum number of interactions.

From: A multi-objective evolutionary algorithm for detecting protein complexes in PPI networks using gene ontology

Noise

Algorithm

Yeast-D1

Yeast-D2

Recall

Precision

F-score

Recall

Precision

F-score

 

\(EA-CS\)

0.4966

0.5368

0.5154

0.3426

0.3259

0.3335

10%

\(EA-CS_{mu}\)

0.5957

0.5295

0.5604

0.3236

0.2623

0.2894

\(\text {MOEA/D}\)

0.5840

0.5805

0.5652

0.3072

0.2986

0.3462

\(\text {MOEA/D}_{mu}\)

0.8218

0.6049

0.6867

0.4427

0.2986

0.3462

\(\text {MOEA}\text{- }GO_{FS-PTO}\)

0.9410

0.7499

0.8183

0.8987

0.5584

0.6812

 

\(EA-CS\)

0.3827

0.5027

0.4338

0.2341

0.2890

0.2579

20%

\(EA-CS_{mu}\)

0.5111

0.4876

0.4988

0.2724

0.2552

0.2632

\(\text {MOEA/D}\)

0.5023

0.5891

0.5118

0.2478

0.3066

0.2579

\(\text {MOEA/D}_{mu}\)

0.8167

0.6093

0.6834

0.4167

0.3032

0.3398

\(\text {MOEA}\text{- }GO_{FS-PTO}\)

0.9308

0.7326

0.8023

0.8960

0.5464

0.6728

 

\(EA-CS\)

0.2853

0.4568

0.3504

0.1619

0.2520

0.1964

30%

\(EA-CS_{mu}\)

0.4278

0.4598

0.4424

0.2138

0.2317

0.2219

\(\text {MOEA/D}\)

0.4238

0.5633

0.4374

0.1940

0.3013

0.2107

\(\text {MOEA/D}_{mu}\)

0.8077

0.5802

0.6656

0.4173

0.2899

.03372

\(\text {MOEA}\text{- }GO_{FS-PTO}\)

0.9397

0.7228

0.8021

0.8907

0.5380

0.6647

 

\(EA-CS\)

0.2049

0.4070

0.2718

0.1220

0.2334

0.1596

40%

\(EA-CS_{mu}\)

0.3786

0.4376

0.4055

0.1849

0.2267

0.2031

\(\text {MOEA/D}\)

0.3562

0.5255

0.3662

0.1634

0.2944

0.1754

\(\text {MOEA/D}_{mu}\)

0.7949

0.5804

0.6565

0.4100

0.2987

0.3323

\(\text {MOEA}\text{- }GO_{FS-PTO}\)

0.9397

0.7091

0.7930

0.8973

0.5356

0.6658

 

\(EA-CS\)

0.1539

0.3624

0.2152

0.0900

0.2116

0.1255

50%

\(EA-CS_{mu}\)

0.3359

0.4257

0.3744

0.1398

0.2072

0.1664

\(\text {MOEA/D}\)

0.3250

0.4639

0.3232

0.1542

0.2628

0.1564

\(\text {MOEA/D}_{mu}\)

0.8051

0.5683

0.6575

0.4020

0.2915

0.3300

\(\text {MOEA}\text{- }GO_{FS-PTO}\)

0.9295

0.7136

0.7970

0.8907

0.5249

0.6548