Table 12 Robustness evaluation in terms of Recall, Precision, and F-score. False interactions are added to proteins of minimum number of interactions.
Noise | Algorithm | Yeast-D1 | Yeast-D2 | ||||
---|---|---|---|---|---|---|---|
Recall | Precision | F-score | Recall | Precision | F-score | ||
10% | \(EA-CS\) | 0.5049 | 0.5371 | 0.5201 | 0.3741 | 0.3396 | 0.3555 |
\(EA-CS_{mu}\) | 0.5846 | 0.5259 | 0.5531 | 0.3380 | 0.2693 | 0.2996 | |
\(\text {MOEA/D}\) | 0.5679 | 0.5799 | 0.5571 | 0.3107 | 0.2963 | 0.2963 | |
\(\text {MOEA/D}_{mu}\) | 0.8192 | 0.6142 | 0.6887 | 0.4207 | 0.3179 | 0.3486 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9333 | 0.8577 | 0.8458 | 0.8980 | 0.6561 | 0.7226 | |
\(EA-CS\) | 0.3513 | 0.7216 | 0.4704 | 0.3250 | 0.3292 | 0.3264 | |
20% | \(EA-CS_{mu}\) | 0.4906 | 0.4678 | 0.4785 | 0.3087 | 0.2612 | 0.2828 |
\(\text {MOEA/D}\) | 0.4743 | 0.6031 | 0.5007 | 0.2601 | 0.3333 | 0.2774 | |
\(\text {MOEA/D}_{mu}\) | 0.7987 | 0.6156 | 0.6881 | 0.4133 | 0.3334 | 0.3489 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9269 | 0.8959 | 0.8690 | 0.8907 | 0.6803 | 0.7425 | |
\(EA-CS\) | 0.3233 | 0.4337 | 0.3699 | 0.2609 | 0.3018 | 0.2791 | |
30% | \(EA-CS_{mu}\) | 0.4291 | 0.4376 | 0.4329 | 0.2576 | 0.2408 | 0.2484 |
\(\text {MOEA/D}\) | 0.3864 | 0.5949 | 0.4256 | 0.2173 | 0.3544 | 0.2456 | |
\(\text {MOEA/D}_{mu}\) | 0.7590 | 0.6004 | 0.6548 | 0.3967 | 0.3219 | 0.3468 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9295 | 0.8951 | 0.8847 | 0.8893 | 0.7447 | 0.7739 | |
\(EA-CS\) | 0.2460 | 0.3853 | 0.2995 | 0.1940 | 0.2623 | 0.2221 | |
40% | \(EA-CS_{mu}\) | 0.3816 | 0.4081 | 0.3937 | 0.1971 | 0.2059 | 0.2009 |
\(\text {MOEA/D}\) | 0.3330 | 0.5573 | 0.3648 | 0.1779 | 0.3387 | 0.2016 | |
\(\text {MOEA/D}_{mu}\) | 0.7590 | 0.5960 | 0.6585 | 0.3967 | 0.3357 | 0.3451 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9090 | 0.9314 | 0.8898 | 0.8980 | 0.8219 | 0.7911 | |
\(EA-CS\) | 0.1773 | 0.3241 | 0.2286 | 0.1429 | 0.2256 | 0.1740 | |
50% | \(EA-CS_{mu}\) | 0.3115 | 0.3554 | 0.3314 | 0.1884 | 0.2145 | 0.2001 |
\(\text {MOEA/D}\) | 0.2916 | 0.5153 | 0.3199 | 0.1554 | 0.3306 | 0.1766 | |
\(\text {MOEA/D}_{mu}\) | 0.7423 | 0.5835 | 0.6318 | 0.3700 | 0.3352 | 0.3336 | |
\(\text {MOEA}\text{- }GO_{FS-PTO}\) | 0.9064 | 0.9561 | 0.8922 | 0.8800 | 0.8289 | 0.7821 |