Fig. 2 | Scientific Reports

Fig. 2

From: Gut microbial ecology and function of a Pakistani cohort with Iron deficiency Anemia

Fig. 2

\(\:\varvec{\beta\:}-\)coefficients returned from GLLVM procedure for model 1 with metadata covariates. Those coefficients which are positively associated with the microbial abundance of a particular species are represented in red color whilst those that are negatively associated are represented with blue color, respectively. Where the coefficients are non-significant, i.e., the 95% confidence interval crosses the 0 boundary, they are greyed out. Since the collation of ASVs was performed at Genus level, all those ASVs that cannot be categorized based on taxonomy are collated under “Unknown” category. For categorical variables, one level acts as a reference and is represented by REF. Taxa for which no taxonomic information was available at genus level were clumped together as Unknowns Note that the results are split across three figures with the remaining genera shown in Figs. 3 and 4, respectively.

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