Table 2 Significant loci associated with the signal peaks for soybean salt tolerance.
From: Mining genetic loci and candidate genes related to salt tolerance traits in soybean
Locus | Trait | Chr | SNP interval | SNP number | Highest association SNP | −log10(P) |
|---|---|---|---|---|---|---|
1 | SFW-STIv;SDW-STIv | 2 | Gm02:1527027–Gm02:1648938 | 15 | Gm02:1559363 | 3.03 –3.83 |
2 | PH-STIv | 2 | Gm02:7622430–Gm02:7702874 | 5 | Gm02:7622430 | 3.14 |
3 | PH-STIv;SFW-STIv | 2 | Gm02:8501084;Gm02:8626991 | 8 | Gm02:8600819 | 3.01–3.46 |
4 | LA-STIv | 10 | Gm10:41250185–Gm10:41371943 | 9 | Gm10:41250185 | 3.05–4.19 |
5 | LA-STIv | 11 | Gm11:32366214–Gm11:32402605 | 7 | Gm11:32384787 | 3.25–3.66 |
6 | SDW-STIv | 15 | Gm15:6861171–Gm15:6997677 | 9 | Gm15:6861171 | 3.14–3.15 |
7 | PH-STIv | 15 | Gm15:49488731–Gm15:49633028 | 16 | Gm15:49630767 | 3.30–4.79 |
8 | PH-STIv | 15 | Gm15:49640970–Gm15:49785222 | 13 | Gm15:49655283 | 3.27–4.79 |
9 | PH-STIv | 15 | Gm15:49798519–Gm15:49844620 | 6 | Gm15:49798519 | 3.29–4.21 |
10 | SDW-STIv | 16 | Gm16:36012669–Gm16:36154637 | 14 | Gm16:36100116 | 3.11–3.12 |
11 | SDW-STIv;SFW-STIv | 16 | Gm16:36170007–Gm16:36287416 | 6 | Gm16:36170007 | 3.02–3.11 |
12 | SDW-STIv;SFW-STIv | 16 | Gm16:36586231–Gm16:36710889 | 5 | Gm16:36682958 | 3.04–4.02 |
13 | SFW-STIv | 19 | Gm19:41980035–Gm19:42127286 | 19 | Gm19:42110952 | 3.05–3.48 |
14 | SFW-STIv | 19 | Gm19:42132009–Gm19:42233967 | 11 | Gm19:42233967 | 3.12–3.48 |
15 | LA-STIv | 20 | Gm20:35654431–Gm20:35796837 | 8 | Gm20:35779800 | 3.24–4.05 |
16 | LA-STIv | 20 | Gm20:35970321–Gm20:36088187 | 7 | Gm20:35975492 | 4.49–5.36 |
17 | LA-STIv | 20 | Gm20:36321103–Gm20:36461144 | 7 | Gm20:36366377 | 3.71–4.93 |
18 | LA-STIv | 20 | Gm20:36570542–Gm20:36715934 | 8 | Gm20:36695741 | 3.54–5.04 |
19 | LA-STIv | 20 | Gm20:36724538–Gm20:36868573 | 8 | Gm20:36823413 | 3.36–5.64 |
20 | LA-STIv | 20 | Gm20:36877549–Gm20:37016269 | 9 | Gm20:36940028 | 3.36–3.74 |
21 | LA-STIv | 20 | Gm20:37036295–Gm20:37185025 | 6 | Gm20:37046302 | 3.11–3.54 |
