Fig. 6

Identification of microbial biomarkers associated with mortality. (a) Pie charts visualize AMR-carrier taxa relative frequency > 0.001 (blue) and relative frequency < 0.001 (grey). (b) Bar plots represent relative frequency of oropharyngeal (OS), and rectal swab (RS) sample. Red bars mean AMR-associated taxa, while grey means non-AMR-associated. (c) Heatmaps visualize Area under curve (AUC) values of oropharyngeal swab, and rectal swab samples. (d) Circular heatmaps represent the logarithm of fold change (log2FC) in oropharyngeal swab, and rectal swab samples. Positive values (blue color) mean more abundant in early mortality samples, and negative values (yellow color) mean more abundant in late mortality samples. Species are listed on the right side, for both oropharyngeal and rectal swab samples. Asterisks indicate significant differences (**** p < 0.0001).