Table 1 Primary and haplotype genome assembly and annotation statistics.
From: The Oryza australiensis genome reveals potential as a source of genes for rice improvement
Primary | Haplotype 1 | Haplotype 2 | |
|---|---|---|---|
Total assembly size (bp) | 908,685,645 | 906,642,021 | 903,514,669 |
Complete BUSCOs (%) | 99.3 | 99.0 | 99.2 |
Scaffold number | 13 | 16 | 18 |
Largest scaffold (bp) | 99,334,057 | 99,281,607 | 98,984,626 |
scaffold N50 (bp) | 76,570,987 | 72,406,816 | 69,627,118 |
scaffold L50 | 6 | 6 | 6 |
GC content (%) | 45.0 | 45.0 | 44.9 |
Total telomere number | 23 | 24 | 23 |
Number of genes | 23,929 | 23,578 | 23,653 |
Number of transcripts | 26,529 | 26,125 | 26,182 |
Repeat element content (%) | 75.9 | 76.5 | 76.3 |
