Table 3 Mutation analysis of sub-genotype XIV.2 peptides against common NDV vaccines and genotypes VII, XVII & XVIII. The differences in the amino acid sequences in each strain is highlighted in bold.
Peptides (Sub-G XIV.2) | Peptide 01 | Peptide 02 | Peptide 03 | Peptide 04 | Peptide 05 | Peptide 06 |
|---|---|---|---|---|---|---|
RRKRFVGA | TAFGPQITS | YTDPYPLVF | MAKSSYKPR | RAKFAWLHI | SVAVSYSLK | |
LaSota (Genotype II) | RQGRLIGA | TVFGPQITS | YTDPYPLIF | MAKSSYKGR | TAKFAWLHI | NVAVSYSLK |
Hitchner-B1 (Genotype II) | RQGRLIGA | TVFGPQITS | YTDPYPLIF | MAKSSYKGR | TAKFAWLHI | NVAVSYSLK |
Komarov (Genotype II) | RQKRFIGA | TVFGPQITS | YTDPYPLIF | MAKSSYKGR | TAKFAWLHI | DVAVSYSLK |
Mukteswar (Genotype III) | RQRRFIGA | TVFGPQITS | YTDPYPLVF | MAKSSYKGR | TAKFAWLHI | NVAVSYSLK |
Genotype VII | RRKRFIGA | TVFGPQITS | YTDPYPLIF | MAKSSYKPQ | RAKFAWLHI | SVAVSYSLK |
Genotype XVII | RQKRFIGA | TVFGPQITS | YTDPYPLVF | MAKSSYKPR | RAKFAWLHI | SVAVSYSLK |
Genotype XVIII | RQKRFIGA | TVFGPQITS | YTDPYPLVF | MAKSSYKPR | RAKFAWLHI | SVAVSYSLK |
