Table 3 Molecular dynamics results of the best 2 shortlisted SiRNAs (siRNA8, siRNA12) targeting GPR10 mRNA.
siRNA name | mRNA target position | Average RMSD (nm) | Average RMSF (nm) | Average Potential Energy (kJ/mol) | Average Radius of Gyration (nm) |
---|---|---|---|---|---|
siRNA8 | 2031–2053 | 0.460142016 | 0.221563902 | −2191432.758 | 3.169483187 |
siRNA12 | 3722–3744 | 0.402216039 | 0.190397079 | −2078929.49 | 3.07525014 |