Table 2 Levels of the 42 selected metabolites, p values, VIP score, and AUC values in urine of 4 w and 7 w AS mouse model.
From: Systematic metabolomic study on the plasma and urine of a mouse model of Alport syndrome
No. | Metabolite | 4 w urine concentration (pg/ng creatinine, mean ± SD) | 7 w urine concentration (pg/ng creatinine, mean ± SD) | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
WT | AS | Normalized valuea | P-valueb | cVIP | AUCd | WT | AS | Normalized valuea | p-valueb | VIPc | AUCd | ||
1 | Lactic acid | 612.6 ± 151.3 | 1460.0 ± 1126.2 | 2.38 | 0.019 | 1.79 | 0.79 | 898.4 ± 378.4 | 4570.6 ± 5107.5 | 5.09 | 0.0021 | 1.52 | 0.90 |
2 | Isovalerylglycine | 823.7 ± 187.9 | 680.7 ± 131.8 | 0.83 | 0.046 | 1.11 | 0.75 | 3209.3 ± 1157.0 | 866.3 ± 523.0 | 0.27 | 0.000043 | 2.00 | 0.99 |
3 | Glutamic acid | 3.9 ± 3.9 | 6.9 ± 3.9 | 1.77 | 0.023 | 1.53 | 0.79 | 333.1 ± 188.2 | 707.5 ± 416.9 | 2.12 | 0.022 | 1.28 | 0.81 |
4 | Proline | 19.8 ± 18.3 | 38.1 ± 20.5 | 1.93 | 0.019 | 1.57 | 0.79 | 55.1 ± 25.4 | 182.1 ± 86.5 | 3.30 | 0.000087 | 1.89 | 0.98 |
5 | Alanine | 20.8 ± 11.6 | 38.0 ± 23.9 | 1.83 | 0.028 | 1.63 | 0.78 | 99.2 ± 23.9 | 389.0 ± 317.0 | 3.92 | 0.000022 | 1.85 | 1.00 |
6 | β-Aminoisobutyric acid | 5.0 ± 3.1 | 2.8 ± 2.0 | 0.56 | 0.039 | 1.36 | 0.76 | 65.2 ± 22.9 | 38.8 ± 11.7 | 0.59 | 0.010 | 1.27 | 0.84 |
7 | Xanthurenic acid | 64.9 ± 19.2 | 47.0 ± 13.8 | 0.72 | 0.028 | 1.33 | 0.78 | 818.4 ± 341.1 | 372.9 ± 152.9 | 0.46 | 0.0041 | 1.50 | 0.88 |
8 | Suberic acid | 26.0 ± 17.0 | 13.2 ± 6.2 | 0.51 | 0.016 | 1.56 | 0.80 | 20.5 ± 10.6 | 52.1 ± 35.9 | 2.54 | 0.0030 | 1.46 | 0.89 |
9 | 5-Hydroxyindoleacetic acid | 37.5 ± 16.7 | 21.9 ± 13.8 | 0.58 | 0.039 | 1.49 | 0.76 | 217.0 ± 76.0 | 398.8 ± 76.1 | 1.84 | 0.00041 | 1.85 | 0.94 |
10 | Ethylmalonic acid | 58.8 ± 20.2 | 36.2 ± 23.5 | 0.62 | 0.019 | 1.74 | 0.79 | 36.3 ± 12.8 | 62.0 ± 32.4 | 1.71 | 0.095 | 1.12 | 0.73 |
11 | Methylsuccinic acid | 54.1 ± 11.1 | 41.0 ± 10.6 | 0.76 | 0.033 | 1.69 | 0.77 | 85.5 ± 29.4 | 78.0 ± 21.7 | 0.91 | 0.720 | 0.28 | 0.56 |
12 | Fumaric acid | 471.3 ± 303.6 | 208.9 ± 137.0 | 0.44 | 0.028 | 1.61 | 0.78 | 322.6 ± 167.2 | 536.5 ± 376.6 | 1.66 | 0.278 | 0.05 | 0.66 |
13 | 3-Hydroxy-3-methylglutaric acid | 246.4 ± 49.3 | 197.4 ± 53.4 | 0.80 | 0.039 | 1.47 | 0.76 | 300.3 ± 169.9 | 259.4 ± 92.5 | 0.86 | 0.842 | 0.05 | 0.53 |
14 | 3-Methyladipic acid | 8.8 ± 3.4 | 5.6 ± 2.2 | 0.63 | 0.016 | 1.62 | 0.80 | 18.0 ± 7.6 | 12.1 ± 2.2 | 0.68 | 0.095 | 1.04 | 0.73 |
15 | cis-Aconitic acid | 681.2 ± 182.9 | 553.9 ± 116.2 | 0.81 | 0.039 | 1.19 | 0.76 | 1137.5 ± 371.1 | 1103.2 ± 542.6 | 0.97 | 0.905 | 0.34 | 0.52 |
16 | 2-Hydroxyhippuric acid | 5.4 ± 1.5 | 3.8 ± 0.7 | 0.69 | 0.016 | 1.77 | 0.80 | 17.5 ± 8.9 | 13.1 ± 3.8 | 0.75 | 0.497 | 0.51 | 0.60 |
17 | 3-Indoleglyoxylic acid | 25.0 ± 6.4 | 18.1 ± 3.7 | 0.72 | 0.0086 | 1.60 | 0.83 | 28.7 ± 9.9 | 32.6 ± 7.9 | 1.14 | 0.400 | 0.58 | 0.62 |
18 | Tryptophan | 7.7 ± 2.7 | 11.8 ± 4.8 | 1.53 | 0.016 | 1.54 | 0.80 | 40.1 ± 10.4 | 56.6 ± 24.4 | 1.41 | 0.133 | 0.82 | 0.71 |
19 | β-Alanine | 6.5 ± 3.2 | 3.4 ± 1.9 | 0.52 | 0.0055 | 1.83 | 0.84 | 100.1 ± 24.0 | 92.4 ± 28.5 | 0.92 | 0.278 | 0.70 | 0.66 |
20 | Pyruvic acid | 227.4 ± 118.0 | 177.7 ± 44.4 | 0.78 | 0.336 | 0.86 | 0.63 | 240.8 ± 50.5 | 373.7 ± 124.7 | 1.55 | 0.0057 | 1.48 | 0.87 |
21 | Acetoacetic acid | 383.5 ± 387.7 | 218.6 ± 167.2 | 0.57 | 0.781 | 0.37 | 0.54 | 91.7 ± 62.7 | 1331.4 ± 932.1 | 14.51 | 0.000022 | 2.02 | 1.00 |
22 | Oxaloacetic acid | 679.4 ± 256.1 | 558.9 ± 190.6 | 0.82 | 0.781 | 0.85 | 0.54 | 794.3 ± 171.6 | 1109.7 ± 185.4 | 1.40 | 0.010 | 1.56 | 0.84 |
23 | Hexanoylglycine | 132.3 ± 89.6 | 73.8 ± 36.0 | 0.56 | 0.159 | 1.31 | 0.68 | 521.2 ± 216.8 | 193.9 ± 81.2 | 0.37 | 0.000022 | 1.91 | 1.00 |
24 | Pimelic acid | 59.4 ± 42.0 | 39.1 ± 8.1 | 0.66 | 0.053 | 1.07 | 0.75 | 63.2 ± 28.2 | 132.9 ± 72.1 | 2.10 | 0.028 | 1.35 | 0.80 |
25 | Azelaic acid | 31.2 ± 36.9 | 15.7 ± 4.5 | 0.50 | 0.403 | 0.76 | 0.61 | 21.9 ± 14.8 | 102.2 ± 97.7 | 4.66 | 0.0057 | 1.47 | 0.87 |
26 | 3-Indolecarboxylic acid | 30.2 ± 14.2 | 18.8 ± 5.3 | 0.62 | 0.062 | 1.37 | 0.74 | 20.8 ± 6.9 | 27.8 ± 4.6 | 1.33 | 0.035 | 1.22 | 0.79 |
27 | Vanillylmandelic acid | 2.3 ± 0.8 | 2.0 ± 0.4 | 0.86 | 0.336 | 0.66 | 0.63 | 2.6 ± 0.9 | 3.8 ± 0.6 | 1.45 | 0.0057 | 1.51 | 0.87 |
28 | Phenylalanine | 42.2 ± 17.1 | 60.0 ± 25.6 | 1.42 | 0.109 | 1.18 | 0.71 | 75.8 ± 22.1 | 155.7 ± 84.5 | 2.05 | 0.0021 | 1.51 | 0.90 |
29 | Citrulline | 0.63 ± 0.46 | 0.57 ± 0.34 | 0.90 | 0.975 | 0.27 | 0.51 | 23.5 ± 10.5 | 59.4 ± 45.3 | 2.53 | 0.028 | 1.38 | 0.80 |
30 | 1-Methylhistidine | 13.7 ± 5.4 | 15.4 ± 4.3 | 1.12 | 0.439 | 0.60 | 0.60 | 68.3 ± 14.4 | 55.9 ± 11.2 | 0.82 | 0.022 | 1.02 | 0.81 |
31 | Picolinic acid | 6.4 ± 7.1 | 6.5 ± 3.1 | 1.01 | 0.250 | 0.53 | 0.65 | 1.7 ± 0.8 | 9.1 ± 10.0 | 5.44 | 0.0076 | 1.37 | 0.86 |
32 | 3-Hydroxyanthranilic acid | 6.4 ± 3.3 | 4.0 ± 3.1 | 0.63 | 0.096 | 1.29 | 0.71 | 10.5 ± 2.9 | 17.5 ± 5.1 | 1.67 | 0.0030 | 1.60 | 0.89 |
33 | Anthranilic acid | 0.56 ± 0.26 | 0.89 ± 0.74 | 1.60 | 0.403 | 0.80 | 0.61 | 0.82 ± 0.46 | 3.6 ± 3.2 | 4.33 | 0.017 | 1.45 | 0.82 |
34 | 5,6-Dihydrouridine | 590.0 ± 193.1 | 514.4 ± 120.4 | 0.87 | 0.369 | 0.52 | 0.62 | 1032.2 ± 405.6 | 521.6 ± 182.4 | 0.51 | 0.0010 | 1.71 | 0.92 |
35 | Pseudouridine | 692.2 ± 371.4 | 498.5 ± 161.8 | 0.72 | 0.439 | 0.55 | 0.60 | 1848.3 ± 792.4 | 1128.7 ± 512.8 | 0.61 | 0.017 | 1.18 | 0.82 |
36 | Uridine | 11.9 ± 6.1 | 11.1 ± 4.8 | 0.93 | 0.643 | 0.01 | 0.56 | 37.0 ± 18.1 | 14.3 ± 11.8 | 0.39 | 0.0048 | 1.57 | 0.89 |
37 | Guanosine | 11.3 ± 7.6 | 13.8 ± 7.0 | 1.22 | 0.224 | 0.80 | 0.66 | 18.7 ± 13.4 | 11.1 ± 10.4 | 0.59 | 0.020 | 1.42 | 0.82 |
38 | Xanthosine | 12.0 ± 10.0 | 5.4 ± 4.1 | 0.45 | 0.250 | 0.90 | 0.65 | 41.9 ± 18.1 | 22.0 ± 13.9 | 0.53 | 0.028 | 1.18 | 0.80 |
39 | 3-Methyluridine | 8.9 ± 2.2 | 7.1 ± 2.2 | 0.79 | 0.062 | 1.15 | 0.74 | 8.4 ± 2.7 | 3.2 ± 2.0 | 0.38 | 0.00041 | 1.37 | 0.94 |
40 | 1-Methylguanosine | 40.5 ± 21.6 | 31.1 ± 9.6 | 0.77 | 0.403 | 0.49 | 0.61 | 25.3 ± 12.3 | 12.3 ± 6.0 | 0.49 | 0.0037 | 1.47 | 0.90 |
41 | N2,N2-Dimethylguanosine | 15.2 ± 6.9 | 11.9 ± 7.0 | 0.78 | 0.141 | 0.83 | 0.69 | 32.5 ± 20.3 | 6.9 ± 4.4 | 0.21 | 0.00049 | 1.81 | 0.98 |
42 | N4-Acetylcytidine | 437.0 ± 142.6 | 372.6 ± 120.1 | 0.85 | 0.305 | 0.66 | 0.63 | 732.8 ± 294.1 | 263.1 ± 239.8 | 0.36 | 0.0030 | 1.50 | 0.89 |