Table 1 Characteristics of liver donors.

From: The liver proteome of individuals with a natural UGT2B17 complete deficiency

Sample #

Sex

Age

Known consumptiona

UGT2B17 genetic status

(# gene copies)b

UGT2B17 peptide quantification

(pmol/mg protein)c

Relative UGT2B17 quantification

(× 105 LFQ)d

1

F

66

S

0

0.1

0

2

F

7

 

0

0.1

0.005

3

M

74

A

0

0.0

0

4

M

58

S

0

0

0

5

F

41

 

2

20.0

2.1

6

M

76

S, A

1

23.5

4.8

7

F

77

 

0

0

0

8

M

59

A

1

29.1

3.9

9

F

77

 

0

0.2

0.9

10

M

69

A

1

20.1

5.0

11

F

45

 

2

5.9

0.3

12

F

56

S, A

1

13.5

2.9

13

F

37

 

2

4.5

0.3

14

F

47

 

1

34.4

11.4

15

F

47

 

0

0

0

  1. aA Alcohol intake; S Smoking.
  2. bComplete germline UGT2B17 gene deletion: 0; One or two UGT2B17 gene copies: 1 or 2. Determined by qPCR and immunoblotting with a UGT2B17 specific monoclonal antibody as described.19 The gene-proficient group was composed of individuals with one or two gene copies given the documented minor gene-dose effect on UGT2B17 expression and activity.8,19,24.
  3. cQuantification by mass spectrometry using a UGT2B17 signature peptide, in hepatic microsomal fractions from the same liver donors, as previously reported.23.
  4. dThis study; relative label-free quantification (LFQ) based on unique UGT2B17 peptides (see Methods section and Supplementary Table 1). The Spearman correlation between quantification by the two MS approaches was elevated (r = 0.953, P = 0.0001).