Table 1 Developed INDELs loci, primer sequences, size range, annealing temperatures and heterozygous individuals numbers.
Loci | Sequence (FP/RP) | Size range | Annealing temperature (°C) | No. of samples amplified | Heterozygous individuals |
---|---|---|---|---|---|
CsSTS97121 | CATGCGATACAGTCACTATACCA | 296 | 53.5 °C | 96 | 12 |
AATTATTTGGCGTCATCTGTTCA | |||||
CsSTS77210 | CATGAATTGTCTCTAGCCTGTCA | 187 | 51.5 °C | 100 | 19 |
TAATTCAGGAGTTGGAGCTATGT | |||||
CsSTS49665 | ATGCCCCATGGAAAACGAAT | 202 | 58 °C | 100 | 16 |
TCTATTTTCCATAGCCTACCGAG | |||||
CsSTS52369 | CATGTGGCAGATATTTCAAGGC | 219 | 58 °C | 96 | 48 |
GCATAAAGCGGCCTACAGAC | |||||
CsSTS73540 | CATGCTGCCGTTAGACTCG | 242 | 58 °C | 84 | 0 |
AATTCGTCCAGAGTTCGGGG | |||||
CsSTS72451 | GAGGAACGAATCAAGTGAGTGT | 245 | 53.5 °C | 84 | 0 |
TGACGTCTGCACACCTAGG | |||||
CsSTS71087 | GCACTCGTTATAGATCAAACACG | 304 | 53.5 °C | 97 | 13 |
GTGCCGTTGTCACTGTATACA |