Table 3 Haplotypes of permethrin-resistant Rh. linnaei ticks identified in this study. 457 individuals were included in the haplotype analysis.

From: Mutations in the voltage-gated sodium channel associated with permethrin resistance in Rhipicephalus linnaei populations in Thailand

  1. (*), Haplotypes identified by the geneHapR software, which is limited to homozygous genotypes, all heterozygous and missing data were removed before analysis, including the step of network plotting. Highlights in grey color denote haplotypes containing heterozygous genotype(s). Red letters represent mutations at each position. H001-H005 are haplotypes identified by the geneHapR package, with their genotypes and % frequency in parentheses. IUPAC nucleotide code: M = A or C, K = G or T, Y = T or C, R = A or G, S = C or G. Data (positions 190, 215, and 2134) used in this analysis were genotyped by DNA sequences and PCR-RFLP assay. IUPAC amino acid code: G = Glycine, F = Phenylalanine, I = Isoleucine, L = Leucine, V = Valine.
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