Table 2 Genes associated with top hypomethylated DMRs in rumen of Treated vs. control dairy buffaloes.
DMR | Methylation status | Mean differential methylation | Gene Name | Biotype | ||
|---|---|---|---|---|---|---|
Chromosome | Start | End | ||||
3 | 161,236,126 | 161,236,217 | hypo | -0.704155475 | TMEM245 | protein_coding |
3 | 161,236,126 | 161,236,217 | hypo | -0.704155475 | CTNNAL1 | protein_coding |
3 | 161,235,399 | 161,235,514 | hypo | -0.639379502 | TMEM245 | protein_coding |
3 | 161,235,399 | 161,235,514 | hypo | -0.639379502 | CTNNAL1 | protein_coding |
16 | 8,804,065 | 8,804,185 | hypo | -0.484772123 | CRY2 | protein_coding |
16 | 8,804,065 | 8,804,185 | hypo | -0.484772123 | MAPK8IP1 | protein_coding |
16 | 8,804,065 | 8,804,185 | hypo | -0.484772123 | CRY2 | protein_coding |
16 | 8,804,065 | 8,804,185 | hypo | -0.484772123 | MAPK8IP1 | protein_coding |
11 | 6,118,713 | 6,118,802 | hypo | -0.45534161 | FLRT2 | protein_coding |
14 | 65,795,601 | 65,795,822 | hypo | -0.453098865 | CCNY | protein_coding |
4 | 41,449,005 | 41,449,091 | hypo | -0.444736089 | CAPRIN2 | protein_coding |
4 | 131,596,590 | 131,597,158 | hypo | -0.403635937 | CHRM3 | protein_coding |
18 | 24,346,317 | 24,346,495 | hypo | -0.391406227 | NUP93 | protein_coding |
11 | 6,117,272 | 6,117,273 | hypo | -0.385417295 | FLRT2 | protein_coding |
3 | 114,699,491 | 114,699,816 | hypo | -0.37488476 | PCSK5 | protein_coding |
10 | 78,127,548 | 78,127,604 | hypo | -0.370835837 | RNF217 | protein_coding |
16 | 69,747,460 | 69,747,503 | hypo | -0.367030935 | SESN3 | protein_coding |
17 | 10,133,858 | 10,133,919 | hypo | -0.364655096 | CABP1 | protein_coding |
17 | 10,133,858 | 10,133,919 | hypo | -0.364655096 | LOC102392827 | lncRNA |
4 | 165,280,373 | 165,280,435 | hypo | -0.336240426 | LOC112584719 | protein_coding |
4 | 165,280,373 | 165,280,435 | hypo | -0.336240426 | LOC112584722 | lncRNA |
6 | 100,526,522 | 100,526,723 | hypo | -0.334208673 | ZSWIM5 | protein_coding |
6 | 100,526,522 | 100,526,723 | hypo | -0.334208673 | UROD | protein_coding |
6 | 100,526,522 | 100,526,723 | hypo | -0.334208673 | HECTD3 | protein_coding |
X | 137,198,514 | 137,198,774 | hypo | -0.33347673 | MTM1 | protein_coding |
22 | 36,553,330 | 36,553,365 | hypo | -0.332047312 | LOC112581388 | lncRNA |
