Table 2 Late and early core microbiomes. A prevalence cutoff of 0.1% and a detection rate of 90% were used.
From: Random mechanisms govern bacterial succession in bioinoculated beet plants
ASV | Detection1 | Abundance2 | Taxonomy |
|---|---|---|---|
Soil early | |||
ASV3 | 97.94 | 4.22 | Pseudoxanthomonas |
ASV4 | 96.11 | 3.74 | Flavobacterium |
ASV5 | 96.80 | 3.14 | Delftia |
ASV6 | 90.16 | 3.77 | Brevundimonas |
ASV14 | 99.77 | 1.58 | Devosia |
ASV44 | 91.76 | 0.31 | Reyranella |
Soil late | |||
ASV3 | 100 | 10.66 | Pseudoxanthomonas |
ASV5 | 100 | 2.28 | Delftia |
ASV10 | 93.53 | 1.83 | Pseudomonas |
ASV11 | 98.24 | 1.27 | Caulobacter |
ASV14 | 100 | 2.09 | Devosia |
ASV21 | 90.88 | 2.37 | Sphingopyxis |
ASV24 | 95.88 | 1.59 | Pseudohangiellaceae, BIyi10 |
ASV27 | 98.53 | 2.05 | Pedobacter |
ASV33 | 99.12 | 1.54 | Micropepsaceae |
ASV38 | 94.71 | 0.78 | Hydrogenophaga |
ASV44 | 98.53 | 0.93 | Reyranella |
ASV54 | 92.35 | 0.73 | Shinella |
ASV58 | 96.47 | 0.37 | Sphingobacteriaceae |
ASV59 | 96.76 | 0.68 | Bosea |
ASV74 | 92.65 | 0.66 | Gemmatirosa |
Root early | |||
ASV4 | 98.50 | 7.92 | Flavobacterium |
ASV5 | 98.80 | 5.75 | Delftia |
ASV14 | 94.31 | 1.21 | Devosia |
Root late | |||
ASV4 | 91.18 | 4.03 | Flavobacterium |
Leaf early | |||
ASV4 | 97.30 | 8.72 | Flavobacterium |
ASV23 | 93.69 | 8.24 | Chryseobacterium |
Leaf late | |||
ASV3 | 96.74 | 3.63 | Pseudoxanthomonas |
ASV4 | 98.91 | 2.19 | Flavobacterium |
ASV6 | 92.39 | 2.45 | Brevundimonas |
ASV11 | 91.30 | 1.70 | Caulobacter |
ASV13 | 94.57 | 2.31 | Sphingobacterium |
ASV15 | 97.83 | 4.18 | Flavobacterium |
ASV17 | 96.74 | 2.43 | Thermomonas |
