Table 2 Characteristics of the variants detected with AutScore.r ≥ 0.335 (N = 67).

From: An integrative scoring approach for prioritization of rare autism spectrum disorder candidate variants from whole exome sequencing data

Functional Consequences

Frequency (%)

Frameshift Insertion/Deletion

17 (25.4%)

Splice Acceptor/Donor

5 (7.46%)

Stop Gained/Lost

13 (19.4%)

Missense

29 (43.3%)

Other

3 (4.48%)

Gene Type

 

SFARI 1

51 (76.1%)

SFARI 2 and 3

11 (16.4%)

Any SFARI

62 (92.5%)

Novel Genes

5 (7.46%)

Inheritance Pattern

 

Denovo

49 (73.1%)

X-linked

8 (11.9%)

Autosomal Recessive

10 (14.9%)

Variant Type

 

Pathogenic (P)

35 (52.2%)

Likely Pathogenic (LP)

18 (26.9%)

VUS/LGD

14 (20.9%)

Clinical Assessment

 

Likely ASD Candidates

53 (79.1%)

Possibly ASD Candidates

10 (14.9%)

Unlikely ASD Candidates

4 (5.97%)

  1. The variant type was determined using InterVar according to the ACMG/AMP criteria10.