Abstract
Drylands cover 40–50% of the Earth’s surface and make an important contribution to the terrestrial carbon sink and the global carbon cycle. However, in addition to extended dry periods, drylands also experience extreme flood events. Here we report carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) emissions from flooded drylands in central Australia (Kati-Thanda-Lake-Eyre basin; KTLE) in 2019. At the time of sampling the wet areas of the KTLE emitted 1.4 ± 0.6 Tg CO2 d− 1 and 0.31 ± 0.13 Gg CH4 d− 1 (24.6 ± 10.6 Gg CO2e) and consumed 3.0 ± 1.3 Mg N2O d− 1 (0.8 ± 0.4 Gg CO2e). The low basin slope resulted in a large area of inundation (up to 33,547 km2), that remained wet for an extended period. Up-scaling the daily fluxes for the changing wet surface area, for the wet period, has the potential to result in 127.1 ± 59.6 Tg of CO2 and 22.2 ± 10.5 Gg of CH4 (1.8 ± 0.8 Tg CO2e) emitted, and 2.5 ± 1.3 Gg of N2O (0.7 ± 0.3 Tg CO2e) consumed (Total = 129.6 ± 59.2 Tg CO2e). The low gradient and associated low volume of water transported and large wet area also resulted in the vertical flux of carbon being much more important than the river transported carbon. This first-order estimate of GHG emissions from the KTLE suggests that when flooded, dryland systems globally have the potential to make a significant (e.g. 2.8% of annual global inland river CO2 emissions), but currently unaccounted for, contribution to global GHG emissions, and may need to be included as feedback in global climate models.
Data availability
All data used in this manuscript is provided in the Supporting Information.
References
Huang, J. et al. Dryland climate change: recent progress and challenges. Rev. Geophys. 55, 719–778 (2017).
Poulter, B. et al. Contribution of semi-arid ecosystems to interannual variability of the global carbon cycle. Nature 509, 600–603 (2014).
Ahlstrom, A. et al. The dominant role of semi-arid ecosystems in the trend and variability of the land CO2 sink. Science 348, 895–899 (2015).
Keller, P. S. al., e. Global CO2 emissions from dry inland waters share common drivers across ecosystems. Nat. Commun. 11, 2126 (2020).
Metz, E. M. et al. Soil respiration–driven CO2 pulses dominate australia’s flux variability. Science 379, 1332–1335 (2023).
Tooth, S. et al. Controls on the genesis, sedimentary architecture, and preservation potential of dry- land alluvial successions in stable continental interiors: insights from the incising modder River, South Africa. J. Sediment. Res. 83, 541–561 (2013).
Jarihani, A. A., Larsen, J. R., Callow, J. N., McVicar, T. R. & Johansen, K. Where does all the water go? Partitioning water transmission loses in a data-sparse, multi-channel and low-gradient dryland river system using modelling and remote sensing. J. Hydrol. 529, 1511–1515 (2015).
Harms, T. K. & Grimm, N. B. Responses of trace gases to hydrologic pulses in desert floodplains. J. Phys. Res. 117, G01035 (2012).
Ma, X. et al. Drought rapidly diminishes the large net CO2 uptake in 2011 over semi-arid Australia. Sci. Rep. 6, 37747 (2016).
Larkin, Z. T., Ralph, T. J., Tooth, S., Fryirs, K. A. & Carthey, A. J. R. Identifying threshold responses of Australian dryland rivers to future hydroclimatic change. Sci. Rep. 10, 6653 (2020).
Allan, R. J. in In Natural History of the Northeast Deserts. (eds Tyler, M. J., Twidale, C. R., Davies, M. & Wells, C. B.) (Royal Society of South Australia Inc.,, 1990).
Habeck-Fardy, A. & Nanson, G. C. Environmental character and history of the lake Eyre Basin, one seventh of the Australian continent. Earth Sci. Rev. 132, 39–66 (2014).
Sturm, K. et al. Sampling considerations and assessment of exetainer usage for measuring dissolved and gaseous methane and nitrous oxide in aquatic systems. Limnol. Oceanogr. Methods. 13, 375–390 (2015).
Sturm, K., Grinham, A., Werner, U. & Yuan, Z. Sources and sinks of methane and nitrous oxide in the subtropical Brisbane river estuary, South East Queensland, Australia. Estuar. Coast. Shelf Sci. 168, 10–21 (2016).
Amorocho, J. & De Vries, J. J. A new evaluation of the wind stress coefficient over water surfaces. J. Phys. Res. 85, 433–442 (1980).
Oakes, J. M., Eyre, B. D., Ross, D. J. & Turner, S. D. Stable isotopes trace estuarine transformations of carbon and nitrogen from primary- and secondary-treated paper and pulp mill effluent. Environ. Sci. Technol. 44, 7411–7417 (2010).
Stoltenberg, L., Schulz, K. G., Cyronak, T. & Eyre, B. D. Seasonal variability of calcium carbonate precipitation and dissolution in shallow coral reef sediments. Limnol. Oceanograph. 65, 876–891 (2020).
McKee, L., Eyre, B. & Hossain, S. Intra- and interannual export of nitrogen and phosphor Us in the subtropical Richmond river catchment, Australia. Hydrol. Process. 14, 1787–1809 (2000).
Wanninkhof, R. Relationship between wind speed and gas exchange over the ocean revisited. Limnol. Oceanograph Methods. 12, 351–362 (2014).
Ran, L. et al. CO2 outgassing from the yellow river network and its implications for riverine carbon cycle. J. Geophys. Res. - Biogeosciences. 120, 1334–1347 (2015).
Alin, S. R. et al. Physical controls on carbon dioxide transfer velocity and flux in low-gradient river systems and implications for regional carbon budgets. J. Geophys. Res. Biogeosci. https://doi.org/10.1029/2010JG001398 (2011).
Beaulieu, J. J. et al. Nitrous oxide emission from denitrification in stream and river networks. Proc. Natl. Acad. Sci. U.S.A. 108, 214–219 (2011).
Cole, J. J. & Caraco, N. F. Atmospheric exchange of carbon dioxide in a low-wind oligotrophic lake measured by the addition of SF. Limnol. Oceanogr. 43, 647–656 (1998).
McGillis, W. R., Edson, J. B., Hare, J. E. & Fairall, C. W. Direct covariance air-sea CO2 fluxes. J. Geophys. Res. - Oceans. 106, 16729–16745 (2001).
Crusius, J. & Wanninkhof, R. Gas transfer velocities measured at low wind speed over a lake. Limnol. Oceanogr. 48, 1010–1017 (2003).
Upstill-Goddard, R. C., Watsin, A. J., Liss, P. S. & Liddicoat, M. I. Gas transfer velocities in lakes measured with SF6. Tellus B: Chem. Phys. Meteorol. 44, 364–377 (1990).
Guérin, F. et al. Gas transfer velocities of CO2 and CH4 in a tropical reservoir and its river downstream. J. Mar. Syst. 66, 161–172 (2007).
Forster, P. et al. In Climate Change 2021: the Physical Science Basis. Contribution of Working Group I To the Sixth Assessment Report of the Intergovernmental Panel on Climate Change et al.) 923–1054 (Cambridge University Press, 2021). (eds V. Masson-Delmotte.
Liu, S. et al. The importance of hydrology in routing terrestrial carbon to the atmosphere via global streams and rivers. Proceedings of the National Academy of Science 119, e2106322119 (2022).
Stanley, E. H. et al. The ecology of methane in streams and rivers: patterns, controls, and global significance. Ecol. Monogr. 86, 146–171 (2016).
Soued, C., del Giorgio, P. A. & Maranger, R. Nitrous oxide sinks and emissions in boreal aquatic networks in Québec. Nat. Geosci. 9, 116–122 (2016).
Yao, Y. et al. Increased global nitrous oxide emissions from streams and rivers in the anthropocene. Nat. Clim. Change. 10, 138–142 (2020).
Hu, M., Chen, D. & Dahlgren, R. A. Modeling nitrous oxide emission from rivers: a global assessment. Global Change Biol. 22, 3566–3582 (2016).
Robertson, A. I., Bunn, S. E., Boon, P. & Walker, K. F. Sources, sinks and transformations of organic carbon in Australian floodplain rivers. Mar. Freshw. Res. 50, 813–829 (1999).
Burford, M. A., Cook, A. J., Fellows, C. S., Balcombe, S. R. & Bunn, S. E. Sources of carbon fuelling production in an arid floodplain river. Mar. Freshw. Res. 59, 224–234 (2008).
Kern, J., Darwich, A., Furch, K. & Junk, W. J. Seasonal denitrification in flooded and exposed sediments from the Amazon floodplain at Lago Camalão. Microb. Ecol. 32, 47–57 (1996).
Eyre, B. D., Kerr, G. & Sullivan, L. A. Deoxygenation potential of the Richmond river estuary floodplain, Northern NSW, Australia. River Res. Appl. 22, 981–992 (2006).
Placella, S. A., Brodie, E. L. & Firestone, M. K. Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups. Proc. Natl. Acad. Sci. 109, 10931–10936 (2012).
Birch, H. The effect of soil drying on humus decomposition and nitrogen availability. Plant. Soil. 10, 9–31 (1958).
Jarvis, P. et al. Drying and wetting of mediterranean soils stimulates decomposition and carbon dioxide emission: the Birch effect. Tree Physiol. 27, 929–940 (2007).
Kim, D. G., Vargas, R., Bond-Lamberty, B. & Turetsky, M. R. Effects of soil rewetting and thawing on soil gas fluxes: A review of current literature and suggestions for future research. Biogeosciences 9, 2459–2483 (2012).
Gallo, E. L., Lohse, K. A., Ferlin, C. M., Meixner, T. & Brooks, P. D. Physical and biological controls on trace gas fluxes in semi-arid urban ephemeral waterways. Biogeochemistry 121, 189–207 (2013).
Soued, C. et al. Salinity causes widespread restriction of methane emissions from small inland waters. Nat. Commun. 15, 717 (2024).
Whitworth, K. L., Baldwin, D. S. & Kerr, J. L. Drought, floods and water quality: drivers of a severe hypoxic Blackwater event in a major river system (the Southern Murray Darling Basin, Australia). J. Hydrol. 450, 190–198 (2012).
Battin, T. J. et al. River ecosystem metabolism and carbon biogeochemistry in a changing world. Nature 613, 449–459 (2023).
Lauerwald, R. et al. Inland Water Greenhouse Gas Budgets for RECCAP2: 2. Regionalization and Homogenization of Estimates. Global Biogeochem. Cycles 37, e2022GB007658 (2022).
Villalobos, Y. et al. A Comprehensive Assessment of Anthropogenic and Natural Sources and Sinks of Australasia’s Carbon Budget. Global Biogeochem. Cycles 37, e2023GB007845 (2023).
McMahon, T. A., Finlayson, B. L., Haines, A. T. & Srikanthan, R. Global Runoff: Continental Comparisons of Annual Flows and Peak Discharges Vol. 116 (Catena Paperback Cremlingen-Destedt., 1992).
Sa´nchez-Andre´s, R., Sa´nchez-Carrillo, S., Ortiz-Llorente, M. J., lvarez-Cobelas, M. A. & Cirujano, S. Do changes in flood pulse duration disturb soil carbon dioxide emissions in semi-arid floodplains? Biogeochemistry 101, 257–267 (2010).
Gómez-Gener, L. et al. Global carbon dioxide efflux from rivers enhanced by high nocturnal emissions. Nat. Geosci. 14, 289–294 (2021).
Qin, Y. et al. Large loss and rapid recovery of vegetation cover and aboveground biomass over forest areas in Australia during 2019–2020. Remote Sens. Environ. 278, 113087 (2022).
Nisbet, E. G. et al. Atmospheric methane: comparison between methane’s record in 2006–2022 and during glacial terminations. Global Biogeochem. Cycles 37, e2023GB007875 (2023).
Nisbet, E. G. Climate feedback on methane from wetlands. Nat. Clim. Change. 13, 421–422. https://doi.org/10.1038/s41558-023-01634-3 (2023).
Queensland, G. Queensland Future Climate High Resolution Projections Data - CMIP5Queensland Government, Queensland, Australia, (2025).
Acknowledgements
We thank Hylton Ward from Elite Aviation Services for flying us safely around one of the most remote places on the planet. Iain Alexander did the surface area estimates. We thank Anju Rana for assessing the response of the Lake Eyre basin to climate change, Pep Canadell for helpful discussions and four reviewers for helpful comments that improved the manuscript. This work was supported by ARC Grant DP220100918 awarded to BDE.
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B.D.E. conceived the project. B.D.E and D.E undertook the field work. B.D.E and J.A.R did the data analysis. B.D.E. wrote the manuscript with input from J.A.R and D.E. All authors reviewed and edited the manuscript.
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Eyre, B.D., Rosentreter, J.A. & Erler, D.V. Significant greenhouse gas emissions from flooded drylands in Kati Thanda Lake Eyre basin in Australia. Sci Rep (2026). https://doi.org/10.1038/s41598-026-35915-6
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DOI: https://doi.org/10.1038/s41598-026-35915-6