Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

Advertisement

Scientific Reports
  • View all journals
  • Search
  • My Account Login
  • Content Explore content
  • About the journal
  • Publish with us
  • Sign up for alerts
  • RSS feed
  1. nature
  2. scientific reports
  3. articles
  4. article
Significant greenhouse gas emissions from flooded drylands in Kati Thanda Lake Eyre basin in Australia
Download PDF
Download PDF
  • Article
  • Open access
  • Published: 19 February 2026

Significant greenhouse gas emissions from flooded drylands in Kati Thanda Lake Eyre basin in Australia

  • Bradley D. Eyre1,
  • Judith A Rosentreter1 &
  • Dirk V. Erler1 

Scientific Reports , Article number:  (2026) Cite this article

  • 136 Accesses

  • Metrics details

We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Biogeochemistry
  • Carbon cycle

Abstract

Drylands cover 40–50% of the Earth’s surface and make an important contribution to the terrestrial carbon sink and the global carbon cycle. However, in addition to extended dry periods, drylands also experience extreme flood events. Here we report carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) emissions from flooded drylands in central Australia (Kati-Thanda-Lake-Eyre basin; KTLE) in 2019. At the time of sampling the wet areas of the KTLE emitted 1.4 ± 0.6 Tg CO2 d− 1 and 0.31 ± 0.13 Gg CH4 d− 1 (24.6 ± 10.6 Gg CO2e) and consumed 3.0 ± 1.3 Mg N2O d− 1 (0.8 ± 0.4 Gg CO2e). The low basin slope resulted in a large area of inundation (up to 33,547 km2), that remained wet for an extended period. Up-scaling the daily fluxes for the changing wet surface area, for the wet period, has the potential to result in 127.1 ± 59.6 Tg of CO2 and 22.2 ± 10.5 Gg of CH4 (1.8 ± 0.8 Tg CO2e) emitted, and 2.5 ± 1.3 Gg of N2O (0.7 ± 0.3 Tg CO2e) consumed (Total = 129.6 ± 59.2 Tg CO2e). The low gradient and associated low volume of water transported and large wet area also resulted in the vertical flux of carbon being much more important than the river transported carbon. This first-order estimate of GHG emissions from the KTLE suggests that when flooded, dryland systems globally have the potential to make a significant (e.g. 2.8% of annual global inland river CO2 emissions), but currently unaccounted for, contribution to global GHG emissions, and may need to be included as feedback in global climate models.

Data availability

All data used in this manuscript is provided in the Supporting Information.

References

  1. Huang, J. et al. Dryland climate change: recent progress and challenges. Rev. Geophys. 55, 719–778 (2017).

    Google Scholar 

  2. Poulter, B. et al. Contribution of semi-arid ecosystems to interannual variability of the global carbon cycle. Nature 509, 600–603 (2014).

    Google Scholar 

  3. Ahlstrom, A. et al. The dominant role of semi-arid ecosystems in the trend and variability of the land CO2 sink. Science 348, 895–899 (2015).

    Google Scholar 

  4. Keller, P. S. al., e. Global CO2 emissions from dry inland waters share common drivers across ecosystems. Nat. Commun. 11, 2126 (2020).

    Google Scholar 

  5. Metz, E. M. et al. Soil respiration–driven CO2 pulses dominate australia’s flux variability. Science 379, 1332–1335 (2023).

    Google Scholar 

  6. Tooth, S. et al. Controls on the genesis, sedimentary architecture, and preservation potential of dry- land alluvial successions in stable continental interiors: insights from the incising modder River, South Africa. J. Sediment. Res. 83, 541–561 (2013).

    Google Scholar 

  7. Jarihani, A. A., Larsen, J. R., Callow, J. N., McVicar, T. R. & Johansen, K. Where does all the water go? Partitioning water transmission loses in a data-sparse, multi-channel and low-gradient dryland river system using modelling and remote sensing. J. Hydrol. 529, 1511–1515 (2015).

    Google Scholar 

  8. Harms, T. K. & Grimm, N. B. Responses of trace gases to hydrologic pulses in desert floodplains. J. Phys. Res. 117, G01035 (2012).

    Google Scholar 

  9. Ma, X. et al. Drought rapidly diminishes the large net CO2 uptake in 2011 over semi-arid Australia. Sci. Rep. 6, 37747 (2016).

    Google Scholar 

  10. Larkin, Z. T., Ralph, T. J., Tooth, S., Fryirs, K. A. & Carthey, A. J. R. Identifying threshold responses of Australian dryland rivers to future hydroclimatic change. Sci. Rep. 10, 6653 (2020).

    Google Scholar 

  11. Allan, R. J. in In Natural History of the Northeast Deserts. (eds Tyler, M. J., Twidale, C. R., Davies, M. & Wells, C. B.) (Royal Society of South Australia Inc.,, 1990).

  12. Habeck-Fardy, A. & Nanson, G. C. Environmental character and history of the lake Eyre Basin, one seventh of the Australian continent. Earth Sci. Rev. 132, 39–66 (2014).

    Google Scholar 

  13. Sturm, K. et al. Sampling considerations and assessment of exetainer usage for measuring dissolved and gaseous methane and nitrous oxide in aquatic systems. Limnol. Oceanogr. Methods. 13, 375–390 (2015).

    Google Scholar 

  14. Sturm, K., Grinham, A., Werner, U. & Yuan, Z. Sources and sinks of methane and nitrous oxide in the subtropical Brisbane river estuary, South East Queensland, Australia. Estuar. Coast. Shelf Sci. 168, 10–21 (2016).

    Google Scholar 

  15. Amorocho, J. & De Vries, J. J. A new evaluation of the wind stress coefficient over water surfaces. J. Phys. Res. 85, 433–442 (1980).

    Google Scholar 

  16. Oakes, J. M., Eyre, B. D., Ross, D. J. & Turner, S. D. Stable isotopes trace estuarine transformations of carbon and nitrogen from primary- and secondary-treated paper and pulp mill effluent. Environ. Sci. Technol. 44, 7411–7417 (2010).

    Google Scholar 

  17. Stoltenberg, L., Schulz, K. G., Cyronak, T. & Eyre, B. D. Seasonal variability of calcium carbonate precipitation and dissolution in shallow coral reef sediments. Limnol. Oceanograph. 65, 876–891 (2020).

    Google Scholar 

  18. McKee, L., Eyre, B. & Hossain, S. Intra- and interannual export of nitrogen and phosphor Us in the subtropical Richmond river catchment, Australia. Hydrol. Process. 14, 1787–1809 (2000).

    Google Scholar 

  19. Wanninkhof, R. Relationship between wind speed and gas exchange over the ocean revisited. Limnol. Oceanograph Methods. 12, 351–362 (2014).

    Google Scholar 

  20. Ran, L. et al. CO2 outgassing from the yellow river network and its implications for riverine carbon cycle. J. Geophys. Res. - Biogeosciences. 120, 1334–1347 (2015).

    Google Scholar 

  21. Alin, S. R. et al. Physical controls on carbon dioxide transfer velocity and flux in low-gradient river systems and implications for regional carbon budgets. J. Geophys. Res. Biogeosci. https://doi.org/10.1029/2010JG001398 (2011).

    Google Scholar 

  22. Beaulieu, J. J. et al. Nitrous oxide emission from denitrification in stream and river networks. Proc. Natl. Acad. Sci. U.S.A. 108, 214–219 (2011).

    Google Scholar 

  23. Cole, J. J. & Caraco, N. F. Atmospheric exchange of carbon dioxide in a low-wind oligotrophic lake measured by the addition of SF. Limnol. Oceanogr. 43, 647–656 (1998).

    Google Scholar 

  24. McGillis, W. R., Edson, J. B., Hare, J. E. & Fairall, C. W. Direct covariance air-sea CO2 fluxes. J. Geophys. Res. - Oceans. 106, 16729–16745 (2001).

    Google Scholar 

  25. Crusius, J. & Wanninkhof, R. Gas transfer velocities measured at low wind speed over a lake. Limnol. Oceanogr. 48, 1010–1017 (2003).

    Google Scholar 

  26. Upstill-Goddard, R. C., Watsin, A. J., Liss, P. S. & Liddicoat, M. I. Gas transfer velocities in lakes measured with SF6. Tellus B: Chem. Phys. Meteorol. 44, 364–377 (1990).

    Google Scholar 

  27. Guérin, F. et al. Gas transfer velocities of CO2 and CH4 in a tropical reservoir and its river downstream. J. Mar. Syst. 66, 161–172 (2007).

    Google Scholar 

  28. Forster, P. et al. In Climate Change 2021: the Physical Science Basis. Contribution of Working Group I To the Sixth Assessment Report of the Intergovernmental Panel on Climate Change et al.) 923–1054 (Cambridge University Press, 2021). (eds V. Masson-Delmotte.

  29. Liu, S. et al. The importance of hydrology in routing terrestrial carbon to the atmosphere via global streams and rivers. Proceedings of the National Academy of Science 119, e2106322119 (2022).

  30. Stanley, E. H. et al. The ecology of methane in streams and rivers: patterns, controls, and global significance. Ecol. Monogr. 86, 146–171 (2016).

    Google Scholar 

  31. Soued, C., del Giorgio, P. A. & Maranger, R. Nitrous oxide sinks and emissions in boreal aquatic networks in Québec. Nat. Geosci. 9, 116–122 (2016).

    Google Scholar 

  32. Yao, Y. et al. Increased global nitrous oxide emissions from streams and rivers in the anthropocene. Nat. Clim. Change. 10, 138–142 (2020).

    Google Scholar 

  33. Hu, M., Chen, D. & Dahlgren, R. A. Modeling nitrous oxide emission from rivers: a global assessment. Global Change Biol. 22, 3566–3582 (2016).

    Google Scholar 

  34. Robertson, A. I., Bunn, S. E., Boon, P. & Walker, K. F. Sources, sinks and transformations of organic carbon in Australian floodplain rivers. Mar. Freshw. Res. 50, 813–829 (1999).

    Google Scholar 

  35. Burford, M. A., Cook, A. J., Fellows, C. S., Balcombe, S. R. & Bunn, S. E. Sources of carbon fuelling production in an arid floodplain river. Mar. Freshw. Res. 59, 224–234 (2008).

    Google Scholar 

  36. Kern, J., Darwich, A., Furch, K. & Junk, W. J. Seasonal denitrification in flooded and exposed sediments from the Amazon floodplain at Lago Camalão. Microb. Ecol. 32, 47–57 (1996).

    Google Scholar 

  37. Eyre, B. D., Kerr, G. & Sullivan, L. A. Deoxygenation potential of the Richmond river estuary floodplain, Northern NSW, Australia. River Res. Appl. 22, 981–992 (2006).

    Google Scholar 

  38. Placella, S. A., Brodie, E. L. & Firestone, M. K. Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups. Proc. Natl. Acad. Sci. 109, 10931–10936 (2012).

    Google Scholar 

  39. Birch, H. The effect of soil drying on humus decomposition and nitrogen availability. Plant. Soil. 10, 9–31 (1958).

    Google Scholar 

  40. Jarvis, P. et al. Drying and wetting of mediterranean soils stimulates decomposition and carbon dioxide emission: the Birch effect. Tree Physiol. 27, 929–940 (2007).

    Google Scholar 

  41. Kim, D. G., Vargas, R., Bond-Lamberty, B. & Turetsky, M. R. Effects of soil rewetting and thawing on soil gas fluxes: A review of current literature and suggestions for future research. Biogeosciences 9, 2459–2483 (2012).

    Google Scholar 

  42. Gallo, E. L., Lohse, K. A., Ferlin, C. M., Meixner, T. & Brooks, P. D. Physical and biological controls on trace gas fluxes in semi-arid urban ephemeral waterways. Biogeochemistry 121, 189–207 (2013).

    Google Scholar 

  43. Soued, C. et al. Salinity causes widespread restriction of methane emissions from small inland waters. Nat. Commun. 15, 717 (2024).

    Google Scholar 

  44. Whitworth, K. L., Baldwin, D. S. & Kerr, J. L. Drought, floods and water quality: drivers of a severe hypoxic Blackwater event in a major river system (the Southern Murray Darling Basin, Australia). J. Hydrol. 450, 190–198 (2012).

    Google Scholar 

  45. Battin, T. J. et al. River ecosystem metabolism and carbon biogeochemistry in a changing world. Nature 613, 449–459 (2023).

    Google Scholar 

  46. Lauerwald, R. et al. Inland Water Greenhouse Gas Budgets for RECCAP2: 2. Regionalization and Homogenization of Estimates. Global Biogeochem. Cycles 37, e2022GB007658 (2022).

    Google Scholar 

  47. Villalobos, Y. et al. A Comprehensive Assessment of Anthropogenic and Natural Sources and Sinks of Australasia’s Carbon Budget. Global Biogeochem. Cycles 37, e2023GB007845 (2023).

    Google Scholar 

  48. McMahon, T. A., Finlayson, B. L., Haines, A. T. & Srikanthan, R. Global Runoff: Continental Comparisons of Annual Flows and Peak Discharges Vol. 116 (Catena Paperback Cremlingen-Destedt., 1992).

  49. Sa´nchez-Andre´s, R., Sa´nchez-Carrillo, S., Ortiz-Llorente, M. J., lvarez-Cobelas, M. A. & Cirujano, S. Do changes in flood pulse duration disturb soil carbon dioxide emissions in semi-arid floodplains? Biogeochemistry 101, 257–267 (2010).

    Google Scholar 

  50. Gómez-Gener, L. et al. Global carbon dioxide efflux from rivers enhanced by high nocturnal emissions. Nat. Geosci. 14, 289–294 (2021).

    Google Scholar 

  51. Qin, Y. et al. Large loss and rapid recovery of vegetation cover and aboveground biomass over forest areas in Australia during 2019–2020. Remote Sens. Environ. 278, 113087 (2022).

    Google Scholar 

  52. Nisbet, E. G. et al. Atmospheric methane: comparison between methane’s record in 2006–2022 and during glacial terminations. Global Biogeochem. Cycles 37, e2023GB007875 (2023).

    Google Scholar 

  53. Nisbet, E. G. Climate feedback on methane from wetlands. Nat. Clim. Change. 13, 421–422. https://doi.org/10.1038/s41558-023-01634-3 (2023).

    Google Scholar 

  54. Queensland, G. Queensland Future Climate High Resolution Projections Data - CMIP5Queensland Government, Queensland, Australia, (2025).

Download references

Acknowledgements

We thank Hylton Ward from Elite Aviation Services for flying us safely around one of the most remote places on the planet. Iain Alexander did the surface area estimates. We thank Anju Rana for assessing the response of the Lake Eyre basin to climate change, Pep Canadell for helpful discussions and four reviewers for helpful comments that improved the manuscript. This work was supported by ARC Grant DP220100918 awarded to BDE.

Author information

Authors and Affiliations

  1. Centre for Coastal Biogeochemistry, Faculty of Science and Engineering, Southern Cross University, PO Box 157, Lismore, NSW, 2480, Australia

    Bradley D. Eyre, Judith A Rosentreter & Dirk V. Erler

Authors
  1. Bradley D. Eyre
    View author publications

    Search author on:PubMed Google Scholar

  2. Judith A Rosentreter
    View author publications

    Search author on:PubMed Google Scholar

  3. Dirk V. Erler
    View author publications

    Search author on:PubMed Google Scholar

Contributions

B.D.E. conceived the project. B.D.E and D.E undertook the field work. B.D.E and J.A.R did the data analysis. B.D.E. wrote the manuscript with input from J.A.R and D.E. All authors reviewed and edited the manuscript.

Corresponding author

Correspondence to Bradley D. Eyre.

Ethics declarations

Competing interests

The authors declare no competing interests.

Additional information

Publisher’s note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Below is the link to the electronic supplementary material.

Supplementary Material 1

Rights and permissions

Open Access This article is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License, which permits any non-commercial use, sharing, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if you modified the licensed material. You do not have permission under this licence to share adapted material derived from this article or parts of it. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc-nd/4.0/.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Eyre, B.D., Rosentreter, J.A. & Erler, D.V. Significant greenhouse gas emissions from flooded drylands in Kati Thanda Lake Eyre basin in Australia. Sci Rep (2026). https://doi.org/10.1038/s41598-026-35915-6

Download citation

  • Received: 26 May 2025

  • Accepted: 08 January 2026

  • Published: 19 February 2026

  • DOI: https://doi.org/10.1038/s41598-026-35915-6

Share this article

Anyone you share the following link with will be able to read this content:

Sorry, a shareable link is not currently available for this article.

Provided by the Springer Nature SharedIt content-sharing initiative

Download PDF

Advertisement

Explore content

  • Research articles
  • News & Comment
  • Collections
  • Subjects
  • Follow us on Facebook
  • Follow us on X
  • Sign up for alerts
  • RSS feed

About the journal

  • About Scientific Reports
  • Contact
  • Journal policies
  • Guide to referees
  • Calls for Papers
  • Editor's Choice
  • Journal highlights
  • Open Access Fees and Funding

Publish with us

  • For authors
  • Language editing services
  • Open access funding
  • Submit manuscript

Search

Advanced search

Quick links

  • Explore articles by subject
  • Find a job
  • Guide to authors
  • Editorial policies

Scientific Reports (Sci Rep)

ISSN 2045-2322 (online)

nature.com sitemap

About Nature Portfolio

  • About us
  • Press releases
  • Press office
  • Contact us

Discover content

  • Journals A-Z
  • Articles by subject
  • protocols.io
  • Nature Index

Publishing policies

  • Nature portfolio policies
  • Open access

Author & Researcher services

  • Reprints & permissions
  • Research data
  • Language editing
  • Scientific editing
  • Nature Masterclasses
  • Research Solutions

Libraries & institutions

  • Librarian service & tools
  • Librarian portal
  • Open research
  • Recommend to library

Advertising & partnerships

  • Advertising
  • Partnerships & Services
  • Media kits
  • Branded content

Professional development

  • Nature Awards
  • Nature Careers
  • Nature Conferences

Regional websites

  • Nature Africa
  • Nature China
  • Nature India
  • Nature Japan
  • Nature Middle East
  • Privacy Policy
  • Use of cookies
  • Legal notice
  • Accessibility statement
  • Terms & Conditions
  • Your US state privacy rights
Springer Nature

© 2026 Springer Nature Limited

Nature Briefing Microbiology

Sign up for the Nature Briefing: Microbiology newsletter — what matters in microbiology research, free to your inbox weekly.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing: Microbiology